RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	F11	P03951	625 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	GDI1	P31150	447 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	NLRP12	P59046	1061 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	DLG4	P78352	724 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	BIRC3	Q13489	604 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	MAPRE1	Q15691	268 aa	Known RBP	18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	DDR2	Q16832	855 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	ZACN	Q401N2	412 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	ZCWPW2	Q504Y3	356 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	SDHAF4	Q5VUM1	108 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	C4orf50	Q6ZRC1	276 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	TPRG1	Q6ZUI0	275 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	ATOH1	Q92858	354 aa	Predicted RBP	18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	MYLPF	Q96A32	169 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	TRMT2B	Q96GJ1	504 aa	Known RBP	18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	MYRFL	Q96LU7	910 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	LTB4R2	Q9NPC1	389 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	HEBP1	Q9NRV9	189 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	FAM86C1	Q9NVL1	165 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	OBP2A	Q9NY56	170 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	MAPK8IP1	Q9UQF2	711 aa		18.91	■□□□□ 0.62
BBS1-223	ENST00000533644	VNN1	O95497	513 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	PRAMEF12	O95522	483 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	DCN	P07585	359 aa	Known RBP	18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	GLUL	P15104	373 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	NR2F2	P24468	414 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	GNL1	P36915	607 aa	Predicted RBP	18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	FAM160A1	Q05DH4	1040 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	NCOA4	Q13772	614 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	C1orf220	Q5T0J3	134 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	CEP135	Q66GS9	1140 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	VSTM1	Q6UX27	236 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	STKLD1	Q8NE28	680 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	MYCBPAP	Q8TBZ2	947 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	LRRC3B	Q96PB8	259 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	SLC46A2	Q9BY10	475 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	SNX25	Q9H3E2	840 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	FRMD4B	Q9Y2L6	1034 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	OBSL1	O75147	1896 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	PTPRD	P23468	1912 aa		18.9	■□□□□ 0.62
BBS1-223	ENST00000533644	GOLGA6L4	A6NEF3	574 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	SLC38A8	A6NNN8	435 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	SOBP	A7XYQ1	873 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	IKBKB	O14920	756 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	ZNF263	O14978	683 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	CHAD	O15335	359 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	LRRN2	O75325	713 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	TADA3	O75528	432 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	AKAP3	O75969	853 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	PDGFRB	P09619	1106 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	DDX6	P26196	483 aa	Known RBP eCLIP	18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	ENPEP	Q07075	957 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	PNOC	Q13519	176 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	ANGPT1	Q15389	498 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	ZNF699	Q32M78	642 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	OR6B3	Q8NGW1	331 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	PCED1B	Q96HM7	432 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	CEP295NL	Q96MC4	621 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	MAGEC2	Q9UBF1	373 aa	Predicted RBP	18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	UXT	Q9UBK9	157 aa	Predicted RBP	18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	NXF1	Q9UBU9	619 aa	Known RBP	18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	MTF2	Q9Y483	593 aa	Predicted RBP	18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	MIA3	Q5JRA6	1907 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	DENND4C	Q5VZ89	1909 aa		18.89	■□□□□ 0.61
BBS1-223	ENST00000533644	TICRR	Q7Z2Z1	1910 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	PROB1	E7EW31	1015 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	CD72	P21854	359 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	RPL13	P26373	211 aa	Known RBP	18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	NBL1	P41271	181 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	MLLT6	P55198	1093 aa	Predicted RBP	18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	MCCD1	P59942	119 aa	Predicted RBP	18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	UBXN2B	Q14CS0	331 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	EDRF1	Q3B7T1	1238 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	ZNF667	Q5HYK9	610 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	ZNF852	Q6ZMS4	543 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	SV2A	Q7L0J3	742 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	CMTM8	Q8IZV2	173 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	ZNF687	Q8N1G0	1237 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	SPATA20	Q8TB22	786 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	SPATA17	Q96L03	361 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	TIGD1	Q96MW7	591 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	NELL2	Q99435	816 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	DPEP3	Q9H4B8	488 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	SMYD3	Q9H7B4	428 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	RMND1	Q9NWS8	449 aa		18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	MAGED2	Q9UNF1	606 aa	Predicted RBP	18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	KIF26A	Q9ULI4	1882 aa	Predicted RBP	18.88	■□□□□ 0.61
BBS1-223	ENST00000533644	FAM170B	A6NMN3	283 aa		18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	F5	P12259	2224 aa		18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	PTPN1	P18031	435 aa	Known RBP	18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	BDNF	P23560	247 aa		18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	TARS	P26639	723 aa	Known RBP	18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	VAMP7	P51809	220 aa		18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	CYP27A1	Q02318	531 aa		18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	COBLL1	Q53SF7	1204 aa		18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	MDH1B	Q5I0G3	518 aa		18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	INTS8	Q75QN2	995 aa	Known RBP	18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	MON1A	Q86VX9	555 aa		18.87	■□□□□ 0.61
BBS1-223	ENST00000533644	GPIHBP1	Q8IV16	184 aa		18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms