RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 FAM200AQ8TCP9 573 aa9.38□□□□□ -0.91
COPB1-210ENST00000533533 SCFD1Q8WVM8 642 aa9.38□□□□□ -0.91
COPB1-210ENST00000533533 ERCC4Q92889 916 aaPredicted RBP9.38□□□□□ -0.91
COPB1-210ENST00000533533 KCNN1Q92952 543 aa9.38□□□□□ -0.91
COPB1-210ENST00000533533 PSMG2Q969U7 264 aa9.38□□□□□ -0.91
COPB1-210ENST00000533533 ZFYVE19Q96K21 471 aa9.38□□□□□ -0.91
COPB1-210ENST00000533533 CBWD1Q9BRT8 395 aa9.38□□□□□ -0.91
COPB1-210ENST00000533533 MKNK1Q9BUB5 465 aa9.38□□□□□ -0.91
COPB1-210ENST00000533533 ATXN3LQ9H3M9 355 aa9.38□□□□□ -0.91
COPB1-210ENST00000533533 C2orf42Q9NWW7 574 aa9.38□□□□□ -0.91
COPB1-210ENST00000533533 OBP2AQ9NY56 170 aa9.38□□□□□ -0.91
COPB1-210ENST00000533533 GTSE1Q9NYZ3 720 aa9.38□□□□□ -0.91
COPB1-210ENST00000533533 UBQLN1Q9UMX0 589 aaKnown RBP9.38□□□□□ -0.91
COPB1-210ENST00000533533 MAPK8IP1Q9UQF2 711 aa9.38□□□□□ -0.91
COPB1-210ENST00000533533 SLC27A5Q9Y2P5 690 aa9.38□□□□□ -0.91
COPB1-210ENST00000533533 PI4KAP42356 2102 aa9.38□□□□□ -0.91
COPB1-210ENST00000533533 TSC2P49815 1807 aa9.38□□□□□ -0.91
COPB1-210ENST00000533533 UBE4BO95155 1302 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 CACNA1EQ15878 2313 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 MTMR11A4FU01 709 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 XPOTO43592 962 aaKnown RBP9.37□□□□□ -0.91
COPB1-210ENST00000533533 GDF9O60383 454 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 SMC2O95347 1197 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 FGF19O95750 216 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 LDHAP00338 332 aaKnown RBP9.37□□□□□ -0.91
COPB1-210ENST00000533533 TYMPP19971 482 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 GARTP22102 1010 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 WEE1P30291 646 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 ADSSP30520 456 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 GUCY2FP51841 1108 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 LILRA4P59901 499 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 UBE2HP62256 183 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 PLCB2Q00722 1185 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 CCINQ13939 588 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 TMEM132DQ14C87 1099 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 PON2Q15165 354 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 GPR158Q5T848 1215 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 ISM2Q6H9L7 571 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 JADE1Q6IE81 842 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 CEP68Q76N32 757 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 EPM2AIP1Q7L775 607 aaPredicted RBP9.37□□□□□ -0.91
COPB1-210ENST00000533533 ITIH5Q86UX2 942 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 GPD1LQ8N335 351 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 SYNPOQ8N3V7 929 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 FAM160A2Q8N612 972 aaPredicted RBP9.37□□□□□ -0.91
COPB1-210ENST00000533533 TTC9BQ8N6N2 239 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 RDH13Q8NBN7 331 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 KIAA0895Q8NCT3 520 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 ZSWIM2Q8NEG5 633 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 ENGASEQ8NFI3 743 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 TTC8Q8TAM2 541 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 SMARCE1Q969G3 411 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 GBP4Q96PP9 640 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 TSPAN18Q96SJ8 248 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 RMND1Q9NWS8 449 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 RBAKQ9NYW8 714 aaPredicted RBP9.37□□□□□ -0.91
COPB1-210ENST00000533533 HSFX1Q9UBD0 423 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 CPSF3Q9UKF6 684 aaKnown RBP9.37□□□□□ -0.91
COPB1-210ENST00000533533 STYXL1Q9Y6J8 313 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 NUP205Q92621 2012 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 FASNP49327 2511 aaKnown RBP9.37□□□□□ -0.91
COPB1-210ENST00000533533 PCNX2A6NKB5 2137 aa9.37□□□□□ -0.91
COPB1-210ENST00000533533 MYO18AQ92614 2054 aaKnown RBP9.36□□□□□ -0.91
COPB1-210ENST00000533533 OBSL1O75147 1896 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 ASCC3Q8N3C0 2202 aaKnown RBP9.36□□□□□ -0.91
COPB1-210ENST00000533533 PPEF2O14830 753 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 EXTL3O43909 919 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 FAM189A1O60320 539 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 EXOC3O60645 756 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 SOAT2O75908 522 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 KIF20AO95235 890 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 PRAMEF12O95522 483 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 ADRB2P07550 413 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 NFICP08651 508 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 PAX3P23760 479 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 GABRR2P28476 465 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 HOXD13P35453 343 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 TFAMQ00059 246 aaKnown RBP9.36□□□□□ -0.91
COPB1-210ENST00000533533 TNK2Q07912 1038 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 EHHADHQ08426 723 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 ST3GAL2Q16842 350 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 KNOP1Q1ED39 458 aaKnown RBP9.36□□□□□ -0.91
COPB1-210ENST00000533533 ARHGAP15Q53QZ3 475 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 SPATA1Q5VX52 437 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 WDR5BQ86VZ2 330 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 CD302Q8IX05 232 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 BPIFB1Q8TDL5 484 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 DDX1Q92499 740 aaKnown RBP9.36□□□□□ -0.91
COPB1-210ENST00000533533 SENP8Q96LD8 212 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 TIGD1Q96MW7 591 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 TMEM209Q96SK2 561 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 TASP1Q9H6P5 420 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 AGPAT3Q9NRZ7 376 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 HSPBP1Q9NZL4 362 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 R3HCC1Q9Y3T6 440 aaKnown RBP9.36□□□□□ -0.91
COPB1-210ENST00000533533 ZFHX4Q86UP3 3567 aa9.36□□□□□ -0.91
COPB1-210ENST00000533533 BAHCC1Q9P281 2608 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 ANKRD11Q6UB99 2663 aaPredicted RBP9.35□□□□□ -0.91
COPB1-210ENST00000533533 ZNF233A6NK53 670 aa9.35□□□□□ -0.91
COPB1-210ENST00000533533 GOLGA6L22H0YM25 854 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms