RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 GPD1P21695 349 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 TPI1P60174 286 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 FAM131BQ86XD5 332 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 MAP4K3Q8IVH8 894 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 TMEM161BQ8NDZ6 487 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 LRRC15Q8TF66 581 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 SERPINB12Q96P63 405 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 WDR70Q9NW82 654 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.98□□□□□ -0.33
RAD50-209ENST00000533482 SMG5Q9UPR3 1016 aaKnown RBP12.98□□□□□ -0.33
RAD50-209ENST00000533482 ENO1P06733 434 aaKnown RBP12.98□□□□□ -0.33
RAD50-209ENST00000533482 TGFB3P10600 412 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 ALDH18A1P54886 795 aaKnown RBP12.98□□□□□ -0.33
RAD50-209ENST00000533482 C1orf146Q5VVC0 180 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 ZSWIM2Q8NEG5 633 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 FBXO41Q8TF61 875 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 BHMTQ93088 406 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 KLRG1Q96E93 195 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 RSAD1Q9HA92 442 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 CTNNAL1Q9UBT7 734 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 NAALADL1Q9UQQ1 740 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 CXCL11O14625 94 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 RIPK2O43353 540 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 NCAM1P13591 858 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 GLRA2P23416 452 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 DEUP1Q05D60 604 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 HSDL1Q3SXM5 330 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 TFDP3Q5H9I0 405 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 PRELID2Q8N945 189 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 ATP6V1E2Q96A05 226 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 GRAMD1AQ96CP6 724 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 PRDM5Q9NQX1 630 aaPredicted RBP12.97□□□□□ -0.33
RAD50-209ENST00000533482 PDGFCQ9NRA1 345 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 DDX20Q9UHI6 824 aaKnown RBP12.97□□□□□ -0.33
RAD50-209ENST00000533482 PCDHA3Q9Y5H8 950 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 ZNF541Q9H0D2 1346 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 TADA2AO75478 443 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 TRPA1O75762 1119 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 TNFSF9P41273 254 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 ZCWPW2Q504Y3 356 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 MAP3K21Q5TCX8 1036 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 NDUFAF2Q8N183 169 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 FBXO36Q8NEA4 188 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 FAM111AQ96PZ2 611 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 USH1CQ9Y6N9 552 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 TRIM49D1C9J1S8 452 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 SMIM24O75264 130 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 COPS2P61201 443 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 ART3Q13508 389 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 HYIQ5T013 277 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 SPOCD1Q6ZMY3 1216 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 TTC39CQ8N584 583 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 DNPEPQ9ULA0 475 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 ROBO3Q96MS0 1386 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 NID2Q14112 1375 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 CFAP73A6NFT4 308 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 H3BRJ5 948 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 C2CD2LO14523 706 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 PSTPIP1O43586 416 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 SKIP12755 728 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 TARSP26639 723 aaKnown RBP12.97□□□□□ -0.33
RAD50-209ENST00000533482 JADE1Q6IE81 842 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 SPATA2LQ8IUW3 424 aaPredicted RBP12.97□□□□□ -0.33
RAD50-209ENST00000533482 PPIL6Q8IXY8 311 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 PABPC5Q96DU9 382 aaKnown RBP12.97□□□□□ -0.33
RAD50-209ENST00000533482 TUBB6Q9BUF5 446 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 SHCBP1LQ9BZQ2 653 aa12.97□□□□□ -0.33
RAD50-209ENST00000533482 IPO11Q9UI26 975 aaKnown RBP12.97□□□□□ -0.33
RAD50-209ENST00000533482 FANCGO15287 622 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 ZC3H11AO75152 810 aaKnown RBP eCLIP12.96□□□□□ -0.33
RAD50-209ENST00000533482 LUC7L3O95232 432 aaKnown RBP12.96□□□□□ -0.33
RAD50-209ENST00000533482 PTPN11Q06124 597 aaPredicted RBP12.96□□□□□ -0.33
RAD50-209ENST00000533482 TAF1BQ53T94 588 aaPredicted RBP12.96□□□□□ -0.33
RAD50-209ENST00000533482 NIPA1Q7RTP0 329 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 ARMC2Q8NEN0 867 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 OR5B17Q8NGF7 314 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 PLEKHA5Q9HAU0 1116 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 GPBP1L1Q9HC44 474 aaPredicted RBP12.96□□□□□ -0.33
RAD50-209ENST00000533482 RRN3P2A6NIE6 340 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 M0R2N6 131 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 B4GALT5O43286 388 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 MAP3K7O43318 606 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 SSTR1P30872 391 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 TAF6P49848 677 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 GCNT1Q02742 428 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 GRIK4Q16099 956 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 CCNG2Q16589 344 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 ZNF662Q6ZS27 426 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 URGCPQ8TCY9 931 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 SEMA4DQ92854 862 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 NCAPGQ9BPX3 1015 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 FAM129AQ9BZQ8 928 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 DCLK3Q9C098 648 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 ABI2Q9NYB9 513 aaPredicted RBP12.96□□□□□ -0.33
RAD50-209ENST00000533482 GTSE1Q9NYZ3 720 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 WHRNQ9P202 907 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 BCAP29Q9UHQ4 241 aa12.96□□□□□ -0.33
RAD50-209ENST00000533482 CASTOR2A6NHX0 329 aa12.96□□□□□ -0.34
RAD50-209ENST00000533482 GAS2O43903 313 aaKnown RBP12.96□□□□□ -0.34
RAD50-209ENST00000533482 TBC1D12O60347 775 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms