RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 CSGALNACT1Q8TDX6 532 aa12.13□□□□□ -0.47
CLCF1-202ENST00000533438 KBTBD7Q8WVZ9 684 aa12.13□□□□□ -0.47
CLCF1-202ENST00000533438 GCNAQ96QF7 691 aa12.13□□□□□ -0.47
CLCF1-202ENST00000533438 IER2Q9BTL4 223 aa12.13□□□□□ -0.47
CLCF1-202ENST00000533438 BLZF1Q9H2G9 400 aa12.13□□□□□ -0.47
CLCF1-202ENST00000533438 C8orf33Q9H7E9 229 aaPredicted RBP12.13□□□□□ -0.47
CLCF1-202ENST00000533438 LMBRD1Q9NUN5 540 aa12.13□□□□□ -0.47
CLCF1-202ENST00000533438 GTF3C4Q9UKN8 822 aa12.13□□□□□ -0.47
CLCF1-202ENST00000533438 PCDHGA2Q9Y5H1 932 aa12.13□□□□□ -0.47
CLCF1-202ENST00000533438 NCOR2Q9Y618 2525 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 MYBPHLA2RUH7 354 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 SLC38A8A6NNN8 435 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 SOBPA7XYQ1 873 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 KINO60870 393 aaKnown RBP12.12□□□□□ -0.47
CLCF1-202ENST00000533438 LILRB5O75023 590 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 TADA3O75528 432 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 NOL4O94818 638 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 TNNC2P02585 160 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 PTMSP20962 102 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 CYP2F1P24903 491 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 DDX6P26196 483 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLCF1-202ENST00000533438 PCSK1P29120 753 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 ME1P48163 572 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 SOX9P48436 509 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 SNRPFP62306 86 aaKnown RBP12.12□□□□□ -0.47
CLCF1-202ENST00000533438 MYO1EQ12965 1108 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 CUL4BQ13620 913 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 PSMD6Q15008 389 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 NFKBIBQ15653 356 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 TAF12Q16514 161 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 SNRNP35Q16560 246 aaKnown RBP12.12□□□□□ -0.47
CLCF1-202ENST00000533438 DDR2Q16832 855 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 SDHAF4Q5VUM1 108 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 TXNDC11Q6PKC3 985 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 TSSK4Q6SA08 328 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 NELFCDQ8IXH7 590 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 C12orf56Q8IXR9 622 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 CMTM8Q8IZV2 173 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 RDH13Q8NBN7 331 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 TRMT2BQ96GJ1 504 aaKnown RBP12.12□□□□□ -0.47
CLCF1-202ENST00000533438 FUBP3Q96I24 572 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLCF1-202ENST00000533438 HPDLQ96IR7 371 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 ZFYVE19Q96K21 471 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 MYRFLQ96LU7 910 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 CGRRF1Q99675 332 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 GZF1Q9H116 711 aaPredicted RBP12.12□□□□□ -0.47
CLCF1-202ENST00000533438 LMAN1LQ9HAT1 526 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 ZSCAN32Q9NX65 697 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 FAM13BQ9NYF5 915 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 GTSE1Q9NYZ3 720 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 ZFHX4Q86UP3 3567 aa12.12□□□□□ -0.47
CLCF1-202ENST00000533438 A0A1W2PQ27 194 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 A0A1W2PQ64 194 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 A0A1W2PQD8 194 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 SPECC1L-ADORA2AF8WAN1 911 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 CLIC2O15247 247 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 KLRC4O43908 158 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 CST3P01034 146 aaPredicted RBP12.11□□□□□ -0.47
CLCF1-202ENST00000533438 TGM1P22735 817 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 LMO2P25791 158 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 CTHP32929 405 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 AFMP43652 599 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 UBE2HP62256 183 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 RPL10AP62906 217 aaKnown RBP12.11□□□□□ -0.47
CLCF1-202ENST00000533438 PLCB2Q00722 1185 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 CYP24A1Q07973 514 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 GAS6Q14393 721 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 TXNDC8Q6A555 127 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 TRAPPC11Q7Z392 1133 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 RALGPS2Q86X27 583 aaPredicted RBP12.11□□□□□ -0.47
CLCF1-202ENST00000533438 CELF5Q8N6W0 485 aaKnown RBP12.11□□□□□ -0.47
CLCF1-202ENST00000533438 MAB21L3Q8N8X9 362 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 XXYLT1Q8NBI6 393 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 SYT15Q9BQS2 421 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 FAM126AQ9BYI3 521 aaPredicted RBP12.11□□□□□ -0.47
CLCF1-202ENST00000533438 SMG9Q9H0W8 520 aaKnown RBP12.11□□□□□ -0.47
CLCF1-202ENST00000533438 SLC39A2Q9NP94 309 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 CRTAC1Q9NQ79 661 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 CGNQ9P2M7 1197 aaKnown RBP12.11□□□□□ -0.47
CLCF1-202ENST00000533438 UXTQ9UBK9 157 aaPredicted RBP12.11□□□□□ -0.47
CLCF1-202ENST00000533438 SERTAD1Q9UHV2 236 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 CDH9Q9ULB4 789 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 MAGED2Q9UNF1 606 aaPredicted RBP12.11□□□□□ -0.47
CLCF1-202ENST00000533438 CCL26Q9Y258 94 aa12.11□□□□□ -0.47
CLCF1-202ENST00000533438 R3HCC1Q9Y3T6 440 aaKnown RBP12.11□□□□□ -0.47
CLCF1-202ENST00000533438 ACTN4O43707 911 aaKnown RBP12.1□□□□□ -0.47
CLCF1-202ENST00000533438 ATP2C2O75185 946 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 GADD45BO75293 160 aaPredicted RBP12.1□□□□□ -0.47
CLCF1-202ENST00000533438 SLFN14P0C7P3 912 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 DLATP10515 647 aaKnown RBP12.1□□□□□ -0.47
CLCF1-202ENST00000533438 TNNI1P19237 187 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 WARSP23381 471 aaKnown RBP12.1□□□□□ -0.47
CLCF1-202ENST00000533438 AVPR1AP37288 418 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 MAGEA11P43364 429 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 CYP2J2P51589 502 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 KPNA1P52294 538 aaPredicted RBP12.1□□□□□ -0.47
CLCF1-202ENST00000533438 TNK2Q07912 1038 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 KNOP1Q1ED39 458 aaKnown RBP12.1□□□□□ -0.47
CLCF1-202ENST00000533438 HS2ST1Q7LGA3 356 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 SPATA2LQ8IUW3 424 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms