RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 C11orf57Q6ZUT1 292 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 PIP4P1Q86T03 277 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 CHCHD4Q8N4Q1 142 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 MLKLQ8NB16 471 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 RNF214Q8ND24 703 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 MCPH1Q8NEM0 835 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 BEST2Q8NFU1 509 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 CCDC26Q8TAB7 109 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 PIGKQ92643 395 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 CCDC47Q96A33 483 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 DNAJC19Q96DA6 116 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 CCDC86Q9H6F5 360 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 TOPORSQ9NS56 1045 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 GKN1Q9NS71 199 aa12.21□□□□□ -0.45
TRAPPC4-213ENST00000533149 GCN1Q92616 2671 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 KRT18P05783 430 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 IDEP14735 1019 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 DPP6P42658 865 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 MAPK8P45983 427 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 DHPSP49366 369 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 SOX4Q06945 474 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 C19orf57Q0VDD7 668 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 C1orf186Q6ZWK4 172 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 UNC13DQ70J99 1090 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 GAREM2Q75VX8 874 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 MAEAQ7L5Y9 396 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 RAB44Q7Z6P3 723 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 ITIH5Q86UX2 942 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 HDDC3Q8N4P3 179 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 TSTD1Q8NFU3 115 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 RPLP0P6Q8NHW5 317 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 ADAM32Q8TC27 787 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 SUSD3Q96L08 255 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 BBC3Q96PG8 261 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 FAM83CQ9BQN1 747 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 RUSC1Q9BVN2 902 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 TASP1Q9H6P5 420 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 CBX8Q9HC52 389 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 POLR3BQ9NW08 1133 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 CACNA2D2Q9NY47 1150 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 ZMYM5Q9UJ78 669 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 NUP205Q92621 2012 aa12.2□□□□□ -0.46
TRAPPC4-213ENST00000533149 USO1O60763 962 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 RHOBTB3O94955 611 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 PRAMEF12O95522 483 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 GABRR2P28476 465 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 ZNF165P49910 485 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 GALK1P51570 392 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 RAD51AP2Q09MP3 1159 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 XKR4Q5GH76 650 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 ZNF658Q5TYW1 1059 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 EEF1DP3Q658K8 133 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 PADI6Q6TGC4 694 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 DNAJB7Q7Z6W7 309 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 CCDC65Q8IXS2 484 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 DEPTORQ8TB45 409 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 HNRNPLLQ8WVV9 542 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 PSMG2Q969U7 264 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 P2RY13Q9BPV8 354 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 CCDC94Q9BW85 323 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 NAT10Q9H0A0 1025 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 CCDC113Q9H0I3 377 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 POLD4Q9HCU8 107 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 GPRC5CQ9NQ84 441 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 EXOC1Q9NV70 894 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 PANK4Q9NVE7 773 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 INVSQ9Y283 1065 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 DMXL2Q8TDJ6 3036 aa12.19□□□□□ -0.46
TRAPPC4-213ENST00000533149 FLNBO75369 2602 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 NUP210Q8TEM1 1887 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 PPP1R3GB7ZBB8 358 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 TNFRSF10BO14763 440 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 ENGP17813 658 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 ATXN3P54252 364 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 YWHAHQ04917 246 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 DUSP4Q13115 394 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 PSMD2Q13200 908 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 ATF7IP2Q5U623 682 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 ALKAL1Q6UXT8 129 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 SYT12Q8IV01 421 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 LRIG1Q96JA1 1093 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 PGLYRP2Q96PD5 576 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 GCNAQ96QF7 691 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 GTPBP4Q9BZE4 634 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 EBF3Q9H4W6 596 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 GRPEL1Q9HAV7 217 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 HPS4Q9NQG7 708 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 DACH1Q9UI36 760 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 PCDHB8Q9UN66 801 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 USP20Q9Y2K6 914 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 AKAP13Q12802 2813 aa12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 DSPP15924 2871 aaKnown RBP12.18□□□□□ -0.46
TRAPPC4-213ENST00000533149 WDFY3Q8IZQ1 3526 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 OTOL1A6NHN0 477 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 OAZ2O95190 189 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 KCNE1P15382 129 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 GUCY2CP25092 1073 aa12.17□□□□□ -0.46
TRAPPC4-213ENST00000533149 CDC25CP30307 473 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms