RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 MORC2Q9Y6X9 1032 aaPredicted RBP18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 ANAPC1Q9H1A4 1944 aa18.35■□□□□ 0.53
RPUSD4-207ENST00000532800 GREB1Q4ZG55 1949 aa18.34■□□□□ 0.53
RPUSD4-207ENST00000532800 NOL4O94818 638 aa18.34■□□□□ 0.53
RPUSD4-207ENST00000532800 RETP07949 1114 aa18.34■□□□□ 0.53
RPUSD4-207ENST00000532800 TMEM191BP0C7N4 346 aa18.34■□□□□ 0.53
RPUSD4-207ENST00000532800 NAIF1Q69YI7 327 aaPredicted RBP18.34■□□□□ 0.53
RPUSD4-207ENST00000532800 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.34■□□□□ 0.53
RPUSD4-207ENST00000532800 MON1AQ86VX9 555 aa18.34■□□□□ 0.53
RPUSD4-207ENST00000532800 GPD1LQ8N335 351 aa18.34■□□□□ 0.53
RPUSD4-207ENST00000532800 OR5B17Q8NGF7 314 aa18.34■□□□□ 0.53
RPUSD4-207ENST00000532800 KIF9Q9HAQ2 790 aa18.34■□□□□ 0.53
RPUSD4-207ENST00000532800 ABCB6Q9NP58 842 aa18.34■□□□□ 0.53
RPUSD4-207ENST00000532800 DCDC2BA2VCK2 349 aa18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 GABRDO14764 452 aa18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 SDHBP21912 280 aa18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 PXNP49023 591 aaPredicted RBP18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 RPL10AP62906 217 aaKnown RBP18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 RBP5P82980 135 aa18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 SOWAHAQ2M3V2 549 aa18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 TMEM196Q5HYL7 178 aa18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 WDR5BQ86VZ2 330 aa18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 CBWD2Q8IUF1 395 aa18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 CCDC65Q8IXS2 484 aa18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 SYNPOQ8N3V7 929 aa18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 TOP6BLQ8N6T0 577 aa18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 SLC22A12Q96S37 553 aa18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 TMEM206Q9H813 350 aa18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 TRPC7Q9HCX4 862 aa18.33■□□□□ 0.52
RPUSD4-207ENST00000532800 EML5Q05BV3 1969 aa18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 PTPRDP23468 1912 aa18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 ATP2C2O75185 946 aa18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 EGFP01133 1207 aa18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 CNR2P34972 360 aa18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 HOXD13P35453 343 aa18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 NASPP49321 788 aaPredicted RBP18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 PSMC1P62191 440 aaKnown RBP18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 SPATA2LQ8IUW3 424 aaPredicted RBP18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 SCN4BQ8IWT1 228 aa18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 FAM160A2Q8N612 972 aaPredicted RBP18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 TTC16Q8NEE8 873 aa18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 KBTBD7Q8WVZ9 684 aa18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 TRMT2BQ96GJ1 504 aaKnown RBP18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 ANKRD36BP1Q96IX9 119 aa18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 MYRFLQ96LU7 910 aa18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 FBRSL1Q9HCM7 1045 aaKnown RBP18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 SEMA4GQ9NTN9 838 aa18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 INTS13Q9NVM9 706 aa18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 POLR3BQ9NW08 1133 aaPredicted RBP18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 UXTQ9UBK9 157 aaPredicted RBP18.32■□□□□ 0.52
RPUSD4-207ENST00000532800 HELZP42694 1942 aaKnown RBP18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 MYO16Q9Y6X6 1858 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 TRDMT1O14717 391 aaKnown RBP18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 STX6O43752 255 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 LRP3O75074 770 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 PCSK1P29120 753 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 HOXA6P31267 233 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 LHX1P48742 406 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 GRSF1Q12849 480 aaKnown RBP eCLIP18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 ZNF268Q14587 947 aaPredicted RBP18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 MTF1Q14872 753 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 STK38Q15208 465 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 ZNF77Q15935 545 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 E2F4Q16254 413 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 CFAP221Q4G0U5 840 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 CC2D1AQ6P1N0 951 aaPredicted RBP18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 PRR23CQ6ZRP0 262 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 CEP68Q76N32 757 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 LINC00301Q8NCQ3 95 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 SPATA18Q8TC71 538 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 MYLPFQ96A32 169 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 INTS4Q96HW7 963 aaKnown RBP18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 CYP2S1Q96SQ9 504 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 RTKNQ9BST9 563 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 ZSCAN16Q9H4T2 348 aaPredicted RBP18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 SPAG17Q6Q759 2223 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 SDK1Q7Z5N4 2213 aa18.31■□□□□ 0.52
RPUSD4-207ENST00000532800 KIAA1549LQ6ZVL6 1849 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 SOBPA7XYQ1 873 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 RNF40O75150 1001 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 LMO2P25791 158 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 FAM160A1Q05DH4 1040 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 USP4Q13107 963 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 FAM171BQ6P995 826 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 LIMS2Q7Z4I7 341 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 FUBP3Q96I24 572 aaKnown RBP eCLIP18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 HPDLQ96IR7 371 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 SYT15Q9BQS2 421 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 TRIM9Q9C026 710 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 TNMDQ9H2S6 317 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 CRTAC1Q9NQ79 661 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 KBTBD4Q9NVX7 518 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 HSPBP1Q9NZL4 362 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 WNT6Q9Y6F9 365 aa18.3■□□□□ 0.52
RPUSD4-207ENST00000532800 TRAV19A0A0A6YYK7 116 aa18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 C2orf78A6NCI8 922 aa18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 ZNF233A6NK53 670 aa18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 KIAA0391O15091 583 aaKnown RBP18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 GDF9O60383 454 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms