RNA–Protein interactions for RNA: ENST00000532718.5

SLC39A4-209, Transcript of solute carrier family 39 member 4, humanhuman

TSL 1 (best)

Gene SLC39A4, Length 668 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-209ENST00000532718 CCL26Q9Y258 94 aa16.34■□□□□ 0.21
SLC39A4-209ENST00000532718 DENND4CQ5VZ89 1909 aa16.34■□□□□ 0.21
SLC39A4-209ENST00000532718 ZNF233A6NK53 670 aa16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 USP17L7P0C7H9 530 aa16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 TGM1P22735 817 aa16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 HOXA6P31267 233 aa16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 AMPD3Q01432 767 aa16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 SRSF5Q13243 272 aaKnown RBP16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 ZNF268Q14587 947 aaPredicted RBP16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 TRIM68Q6AZZ1 485 aa16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 C4orf50Q6ZRC1 276 aa16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 TMEM150AQ86TG1 271 aa16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 WDR5BQ86VZ2 330 aa16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 STKLD1Q8NE28 680 aa16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 NETO1Q8TDF5 533 aa16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 INTS4Q96HW7 963 aaKnown RBP16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 FUBP3Q96I24 572 aaKnown RBP eCLIP16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 USP28Q96RU2 1077 aa16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 MTMR12Q9C0I1 747 aa16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 SEMA4GQ9NTN9 838 aa16.33■□□□□ 0.2
SLC39A4-209ENST00000532718 TRAV19A0A0A6YYK7 116 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 FRMD3A2A2Y4 597 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 DCDC2BA2VCK2 349 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 TRDMT1O14717 391 aaKnown RBP16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 NOL4O94818 638 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 CKMP06732 381 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 IFNAR2P48551 515 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 FAM160A1Q05DH4 1040 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 CSRP2Q16527 193 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 DUOXA2Q1HG44 320 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 TMEM196Q5HYL7 178 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 WDR44Q5JSH3 913 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 DPH6Q7L8W6 267 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 CPA6Q8N4T0 437 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 ATG2BQ96BY7 2078 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 TRMT2BQ96GJ1 504 aaKnown RBP16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 HPDLQ96IR7 371 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 KIAA1586Q9HCI6 787 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 HPS4Q9NQG7 708 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 FOXD4L1Q9NU39 408 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 INTS13Q9NVM9 706 aa16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 DUS2Q9NX74 493 aaKnown RBP16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 MAGEC2Q9UBF1 373 aaPredicted RBP16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 MORC2Q9Y6X9 1032 aaPredicted RBP16.32■□□□□ 0.2
SLC39A4-209ENST00000532718 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 CCDC192P0DO97 292 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 DRD1P21728 446 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 NR1H3Q13133 447 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 KCNB1Q14721 858 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 MTF1Q14872 753 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 MAPRE1Q15691 268 aaKnown RBP16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 CFAP221Q4G0U5 840 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 FBXO43Q4G163 708 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 LMBRD2Q68DH5 695 aaPredicted RBP16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 FSTL4Q6MZW2 842 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 OSTM1Q86WC4 334 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 FAM160A2Q8N612 972 aaPredicted RBP16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 MYRFLQ96LU7 910 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 ZNF396Q96N95 335 aaPredicted RBP16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 MMS19Q96T76 1030 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 P2RY13Q9BPV8 354 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 FGFBP2Q9BYJ0 223 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 TNMDQ9H2S6 317 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 C2orf42Q9NWW7 574 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 CDH9Q9ULB4 789 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 MTMR6Q9Y217 621 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 SPTBN2O15020 2390 aa16.31■□□□□ 0.2
SLC39A4-209ENST00000532718 NCOR2Q9Y618 2525 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 SDK1Q7Z5N4 2213 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 A0A087X0B3 334 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 GABRDO14764 452 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 STX6O43752 255 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 RPP40O75818 363 aaKnown RBP16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 ARSAP15289 507 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 ANXA13P27216 316 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 GRIK1P39086 918 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 MAGEA11P43364 429 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 PDE6CP51160 858 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 GALK1P51570 392 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 ASIC1P78348 528 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 SOWAHAQ2M3V2 549 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 PRR23CQ6ZRP0 262 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 CACNA2D4Q7Z3S7 1137 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 ATP2A3Q93084 1043 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 FAM84AQ96KN4 292 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 FNBP1Q96RU3 617 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 SYT15Q9BQS2 421 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 CUEDC2Q9H467 287 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 EHD2Q9NZN4 543 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 SIX4Q9UIU6 781 aa16.3■□□□□ 0.2
SLC39A4-209ENST00000532718 OBSL1O75147 1896 aa16.29■□□□□ 0.2
SLC39A4-209ENST00000532718 CCDC163A0A0D9SF12 145 aa16.29■□□□□ 0.2
SLC39A4-209ENST00000532718 AXIN1O15169 862 aa16.29■□□□□ 0.2
SLC39A4-209ENST00000532718 SPTLC2O15270 562 aa16.29■□□□□ 0.2
SLC39A4-209ENST00000532718 RNF40O75150 1001 aa16.29■□□□□ 0.2
SLC39A4-209ENST00000532718 EGFP01133 1207 aa16.29■□□□□ 0.2
SLC39A4-209ENST00000532718 HDCP19113 662 aa16.29■□□□□ 0.2
SLC39A4-209ENST00000532718 PXNP49023 591 aaPredicted RBP16.29■□□□□ 0.2
SLC39A4-209ENST00000532718 NASPP49321 788 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms