RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 STRA6Q9BX79 667 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 VN1R3Q9BXE9 311 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 HAPLN2Q9GZV7 340 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 ZBP1Q9H171 429 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 UBE2ZQ9H832 354 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 ZNF395Q9H8N7 513 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 RPF1Q9H9Y2 349 aaKnown RBP6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 PLEKHA5Q9HAU0 1116 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 MRPL17Q9NRX2 175 aaKnown RBP6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 MARCH5Q9NX47 278 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 CACNG4Q9UBN1 327 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 ADAM28Q9UKQ2 775 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 SSX2IPQ9Y2D8 614 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 STYXL1Q9Y6J8 313 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 RALGAPA2Q2PPJ7 1873 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 SF3B1O75533 1304 aaKnown RBP eCLIP6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 CFAP69A5D8W1 941 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 TISP43B9A030 160 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 F8W810 466 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 H3BQ06 376 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 C2CD2LO14523 706 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 LINC01565O15544 149 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 MEFVO15553 781 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 FAM189A1O60320 539 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 PRPF6O94906 941 aaKnown RBP6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 ZNF202O95125 648 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 ZIC2O95409 532 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 URODP06132 367 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 TNFSF9P41273 254 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 GLUD2P49448 558 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 ACOT2P49753 483 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 NDUFV1P49821 464 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 CLCNKBP51801 687 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 SPAG1Q07617 926 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 ADAM15Q13444 863 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 TRIP4Q15650 581 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 PTPN14Q15678 1187 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 ALFQ53S48 1182 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 ZBTB41Q5SVQ8 909 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 FUT10Q6P4F1 479 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 DCLRE1AQ6PJP8 1040 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 TAS1R1Q7RTX1 841 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 CD302Q8IX05 232 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 HASPINQ8TF76 798 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 AUTS2Q8WXX7 1259 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 SUSD3Q96L08 255 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 ZMAT2Q96NC0 199 aaKnown RBP6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 NAP1L5Q96NT1 182 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 TSPAN18Q96SJ8 248 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 PAAF1Q9BRP4 392 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 FAM213AQ9BRX8 229 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 HERC2P3Q9BVR0 1158 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 EMILIN2Q9BXX0 1053 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 FGFBP2Q9BYJ0 223 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 IKZF4Q9H2S9 585 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 GOLPH3LQ9H4A5 285 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 LIN7BQ9HAP6 207 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 ABCB6Q9NP58 842 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 C11orf16Q9NQ32 467 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 CHMP5Q9NZZ3 219 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 TAGLN3Q9UI15 199 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 CPSF3Q9UKF6 684 aaKnown RBP6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 AGO2Q9UKV8 859 aaKnown RBP6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 IRAK3Q9Y616 596 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 KCNMB2Q9Y691 235 aa6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 FNDC1Q4ZHG4 1894 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P42-201ENST00000532126 TTC26A0AVF1 554 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 LACTBL1A8MY62 500 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 TMEM189-UBE2V1I3L0A0 370 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 AGRPO00253 132 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 PODXLO00592 558 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 KHNYNO15037 678 aaKnown RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 EIF3DO15371 548 aaKnown RBP eCLIP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 XPOTO43592 962 aaKnown RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 TRAPPC3O43617 180 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 KLRC4O43908 158 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 CLASP2O75122 1294 aaKnown RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 TBX10O75333 385 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 TCEA3O75764 348 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 GLP2RO95838 553 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 EFEMP2O95967 443 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 RPN1P04843 607 aaKnown RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 CELA3AP09093 270 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 KLRC2P26717 231 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 ADSSP30520 456 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 RPL9P32969 192 aaKnown RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 GPC1P35052 558 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 LTBRP36941 435 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 SLC19A1P41440 591 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 HTR3AP46098 478 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 PPM1FP49593 454 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 DGKGP49619 791 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 KCNQ1P51787 676 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 POU5F1Q01860 360 aaKnown RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 DSG1Q02413 1049 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 SOX4Q06945 474 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 DLX2Q07687 328 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 ELAVL2Q12926 359 aaKnown RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 CLUL1Q15846 466 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 UPP1Q16831 310 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms