RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 SIX1Q15475 284 aaPredicted RBP11.88□□□□□ -0.51
NXF1-211ENST00000531709 MROH9Q5TGP6 573 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 FAM160B1Q5W0V3 765 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 MAGEC3Q8TD91 643 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 ATP2A3Q93084 1043 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 NSL1Q96IY1 281 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 RNPEPL1Q9HAU8 725 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 FBXO6Q9NRD1 293 aaPredicted RBP11.88□□□□□ -0.51
NXF1-211ENST00000531709 STK32BQ9NY57 414 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 ZC3H7BQ9UGR2 993 aaKnown RBP11.88□□□□□ -0.51
NXF1-211ENST00000531709 CHKBQ9Y259 395 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 STARD13Q9Y3M8 1113 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 PTPN4P29074 926 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 STAT5BP51692 787 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 ZNF516Q92618 1163 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 FERMT1Q9BQL6 677 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 TUBB6Q9BUF5 446 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 MRPL4Q9BYD3 311 aaKnown RBP11.88□□□□□ -0.51
NXF1-211ENST00000531709 NIF3L1Q9GZT8 377 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 MIS12Q9H081 205 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 PCMTD2Q9NV79 361 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 RIPK3Q9Y572 518 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 YDJCA8MPS7 323 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 LMNAP02545 664 aaKnown RBP11.87□□□□□ -0.51
NXF1-211ENST00000531709 PDGFRAP16234 1089 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 HSD17B4P51659 736 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 BMPR2Q13873 1038 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 PSMD6Q15008 389 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 PDK4Q16654 411 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 SGSM1Q2NKQ1 1148 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 TXNRD3NBQ6F5E7 133 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 SAMD7Q7Z3H4 446 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 FAM13CQ8NE31 585 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 STK32AQ8WU08 396 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 DEPDC1BQ8WUY9 529 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 TMEM120AQ9BXJ8 343 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 CCDC134Q9H6E4 229 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.87□□□□□ -0.51
NXF1-211ENST00000531709 SLC17A7Q9P2U7 560 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 ZBTB48P10074 688 aaPredicted RBP11.87□□□□□ -0.51
NXF1-211ENST00000531709 NRLP54845 237 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 DCAF15Q66K64 600 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 NME8Q8N427 588 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 CCNYQ8ND76 341 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 AGR3Q8TD06 166 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 PRPF31Q8WWY3 499 aaKnown RBP11.87□□□□□ -0.51
NXF1-211ENST00000531709 AKT1S1Q96B36 256 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 ZBTB10Q96DT7 871 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 ACAD9Q9H845 621 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 TTLL3Q9Y4R7 772 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 MYPNQ86TC9 1320 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 ADGRA3Q8IWK6 1321 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 KIAA1551Q9HCM1 1747 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 SPECC1L-ADORA2AF8WAN1 911 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 EDF1O60869 148 aaKnown RBP11.87□□□□□ -0.51
NXF1-211ENST00000531709 CST3P01034 146 aaPredicted RBP11.87□□□□□ -0.51
NXF1-211ENST00000531709 TNFSF9P41273 254 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 ATG16L1Q676U5 607 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 MON1BQ7L1V2 547 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 RTKN2Q8IZC4 609 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 ALLCQ8N6M5 410 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 PPP4R1Q8TF05 950 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 PCDH9Q9HC56 1237 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 ARHGEF3Q9NR81 526 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 ASNSD1Q9NWL6 643 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 GPATCH2LQ9NWQ4 482 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 SLC24A2Q9UI40 661 aa11.87□□□□□ -0.51
NXF1-211ENST00000531709 A6NJR5 290 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 PRKCBP05771 671 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 UBTFL6P0CB48 400 aaPredicted RBP11.86□□□□□ -0.51
NXF1-211ENST00000531709 P4HA1P13674 534 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 GLRA2P23416 452 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 AP1ARQ63HQ0 302 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 DDX1Q92499 740 aaKnown RBP11.86□□□□□ -0.51
NXF1-211ENST00000531709 FAM149B1Q96BN6 582 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 ATXN7L3BQ96GX2 97 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 KLC2Q9H0B6 622 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 SLC38A10Q9HBR0 1119 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 APOBEC3GQ9HC16 384 aaKnown RBP11.86□□□□□ -0.51
NXF1-211ENST00000531709 ZFATQ9P243 1243 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 SHOC2Q9UQ13 582 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 WNT10BO00744 389 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 AVILO75366 819 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 OATP04181 439 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 ABCD1P33897 745 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 PTDSS1P48651 473 aaKnown RBP11.86□□□□□ -0.51
NXF1-211ENST00000531709 HIRAP54198 1017 aaPredicted RBP11.86□□□□□ -0.51
NXF1-211ENST00000531709 GAD2Q05329 585 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 FAAP100Q0VG06 881 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 TFDP2Q14188 446 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 SPDYE2Q495Y8 402 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 SLC39A4Q6P5W5 647 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 NIPA1Q7RTP0 329 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 ASAP3Q8TDY4 903 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 GPRASP2Q96D09 838 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 CGRRF1Q99675 332 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 APOL6Q9BWW8 343 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 DCLRE1BQ9H816 532 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 HESX1Q9UBX0 185 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 COQ4Q9Y3A0 265 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms