RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 EGFP01133 1207 aa20.5■□□□□ 0.87
UBXN1-212ENST00000531625 KRT18P05783 430 aaKnown RBP20.5■□□□□ 0.87
UBXN1-212ENST00000531625 CSH1P0DML2 217 aa20.5■□□□□ 0.87
UBXN1-212ENST00000531625 CSH2P0DML3 217 aa20.5■□□□□ 0.87
UBXN1-212ENST00000531625 MCM6Q14566 821 aa20.5■□□□□ 0.87
UBXN1-212ENST00000531625 PDGFRLQ15198 375 aa20.5■□□□□ 0.87
UBXN1-212ENST00000531625 CCDC6Q16204 474 aa20.5■□□□□ 0.87
UBXN1-212ENST00000531625 NFE2Q16621 373 aaPredicted RBP20.5■□□□□ 0.87
UBXN1-212ENST00000531625 SV2CQ496J9 727 aa20.5■□□□□ 0.87
UBXN1-212ENST00000531625 TXNDC8Q6A555 127 aa20.5■□□□□ 0.87
UBXN1-212ENST00000531625 CC2D1AQ6P1N0 951 aaPredicted RBP20.5■□□□□ 0.87
UBXN1-212ENST00000531625 MRPS31Q92665 395 aaKnown RBP20.5■□□□□ 0.87
UBXN1-212ENST00000531625 EXOC4Q96A65 974 aa20.5■□□□□ 0.87
UBXN1-212ENST00000531625 SCAND2PQ9GZW5 306 aaPredicted RBP20.5■□□□□ 0.87
UBXN1-212ENST00000531625 ZHX3Q9H4I2 956 aa20.5■□□□□ 0.87
UBXN1-212ENST00000531625 FBRSL1Q9HCM7 1045 aaKnown RBP20.5■□□□□ 0.87
UBXN1-212ENST00000531625 TCHHQ07283 1943 aa20.5■□□□□ 0.87
UBXN1-212ENST00000531625 EML5Q05BV3 1969 aa20.5■□□□□ 0.87
UBXN1-212ENST00000531625 FAM208BQ5VWN6 2430 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 TISP43B9A030 160 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 ARSAP15289 507 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 PLCG1P19174 1290 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 KCNA4P22459 653 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 MPLP40238 635 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 PNPLA4P41247 253 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 TSPY1Q01534 308 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 PLK5Q496M5 336 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 ZC2HC1CQ53FD0 456 aaPredicted RBP20.49■□□□□ 0.87
UBXN1-212ENST00000531625 CRELD2Q6UXH1 353 aaPredicted RBP20.49■□□□□ 0.87
UBXN1-212ENST00000531625 EFCAB13Q8IY85 973 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 RIN3Q8TB24 985 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 ZNF560Q96MR9 790 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 GDPD2Q9HCC8 539 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 ABCB6Q9NP58 842 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 VPS45Q9NRW7 570 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 TMLHEQ9NVH6 421 aa20.49■□□□□ 0.87
UBXN1-212ENST00000531625 OBSL1O75147 1896 aa20.48■□□□□ 0.87
UBXN1-212ENST00000531625 PRPF40AO75400 957 aaKnown RBP20.48■□□□□ 0.87
UBXN1-212ENST00000531625 IL18RAPO95256 599 aa20.48■□□□□ 0.87
UBXN1-212ENST00000531625 GALK1P51570 392 aa20.48■□□□□ 0.87
UBXN1-212ENST00000531625 POSTNQ15063 836 aa20.48■□□□□ 0.87
UBXN1-212ENST00000531625 RASSF8Q8NHQ8 419 aa20.48■□□□□ 0.87
UBXN1-212ENST00000531625 P2RY13Q9BPV8 354 aa20.48■□□□□ 0.87
UBXN1-212ENST00000531625 LSM14BQ9BX40 385 aaKnown RBP20.48■□□□□ 0.87
UBXN1-212ENST00000531625 UXTQ9UBK9 157 aaPredicted RBP20.48■□□□□ 0.87
UBXN1-212ENST00000531625 CUTAO60888 179 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 ADSSP30520 456 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 GJA4P35212 333 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 TXLNAP40222 546 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 KARSQ15046 597 aaKnown RBP20.47■□□□□ 0.87
UBXN1-212ENST00000531625 SYT13Q7L8C5 426 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 ZNF720Q7Z2F6 126 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 CPA6Q8N4T0 437 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 LARP4BQ92615 738 aaKnown RBP20.47■□□□□ 0.87
UBXN1-212ENST00000531625 HVCN1Q96D96 273 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 TRMT2BQ96GJ1 504 aaKnown RBP20.47■□□□□ 0.87
UBXN1-212ENST00000531625 EPSTI1Q96J88 318 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 MYRFLQ96LU7 910 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 ACBD6Q9BR61 282 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 PI4K2AQ9BTU6 479 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 DUSP15Q9H1R2 295 aaPredicted RBP20.47■□□□□ 0.87
UBXN1-212ENST00000531625 TMEM206Q9H813 350 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 ECT2Q9H8V3 914 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 EBF1Q9UH73 591 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 PCDHA7Q9UN72 937 aa20.47■□□□□ 0.87
UBXN1-212ENST00000531625 MAGED2Q9UNF1 606 aaPredicted RBP20.47■□□□□ 0.87
UBXN1-212ENST00000531625 TADA3O75528 432 aa20.46■□□□□ 0.87
UBXN1-212ENST00000531625 NOL4O94818 638 aa20.46■□□□□ 0.87
UBXN1-212ENST00000531625 GPR15P49685 360 aa20.46■□□□□ 0.87
UBXN1-212ENST00000531625 RPL10AP62906 217 aaKnown RBP20.46■□□□□ 0.87
UBXN1-212ENST00000531625 FAM160A1Q05DH4 1040 aa20.46■□□□□ 0.87
UBXN1-212ENST00000531625 MTF1Q14872 753 aa20.46■□□□□ 0.87
UBXN1-212ENST00000531625 USP49Q70CQ1 688 aa20.46■□□□□ 0.87
UBXN1-212ENST00000531625 PDCL2Q8N4E4 241 aa20.46■□□□□ 0.87
UBXN1-212ENST00000531625 OSCP1Q8WVF1 389 aa20.46■□□□□ 0.87
UBXN1-212ENST00000531625 POMGNT1Q8WZA1 660 aa20.46■□□□□ 0.87
UBXN1-212ENST00000531625 HHIPQ96QV1 700 aa20.46■□□□□ 0.87
UBXN1-212ENST00000531625 POLR3BQ9NW08 1133 aaPredicted RBP20.46■□□□□ 0.87
UBXN1-212ENST00000531625 PPP1R37O75864 691 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 RHOBTB1O94844 696 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 KCNK5O95279 499 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 APBB3O95704 486 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 ELF2Q15723 593 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 ZNF77Q15935 545 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 NAIF1Q69YI7 327 aaPredicted RBP20.45■□□□□ 0.86
UBXN1-212ENST00000531625 TMEM86AQ8N2M4 240 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 RPLP0P6Q8NHW5 317 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 SPATA18Q8TC71 538 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 ATP2A3Q93084 1043 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 ACDQ96AP0 544 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 PKMYT1Q99640 499 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 STRA6Q9BX79 667 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 SMOC1Q9H4F8 434 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 L1RE1Q9UN81 338 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 ABCA7Q8IZY2 2146 aa20.45■□□□□ 0.86
UBXN1-212ENST00000531625 HUS1O60921 280 aa20.44■□□□□ 0.86
UBXN1-212ENST00000531625 USP17L7P0C7H9 530 aa20.44■□□□□ 0.86
UBXN1-212ENST00000531625 CYP2F1P24903 491 aa20.44■□□□□ 0.86
UBXN1-212ENST00000531625 USP4Q13107 963 aa20.44■□□□□ 0.86
UBXN1-212ENST00000531625 DMC1Q14565 340 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms