RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 PKMYT1Q99640 499 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 B3GNT5Q9BYG0 378 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 LMAN2LQ9H0V9 348 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 PRDM12Q9H4Q4 367 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 RXFP1Q9HBX9 757 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 FNIP2Q9P278 1114 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 CFHP08603 1231 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 HNRNPH3P31942 346 aaKnown RBP18.73■□□□□ 0.59
CTSB-222ENST00000531551 PRKCIP41743 596 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 NFE2Q16621 373 aaPredicted RBP18.73■□□□□ 0.59
CTSB-222ENST00000531551 PTPROQ16827 1216 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 HGSNATQ68CP4 663 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 C4orf50Q6ZRC1 276 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 RBM23Q86U06 439 aaKnown RBP18.73■□□□□ 0.59
CTSB-222ENST00000531551 ATAD1Q8NBU5 361 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 CHP1Q99653 195 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 AGPAT1Q99943 283 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.73■□□□□ 0.59
CTSB-222ENST00000531551 RHOBTB2Q9BYZ6 727 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 ZNF518BQ9C0D4 1074 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 TTYH1Q9H313 450 aaPredicted RBP18.73■□□□□ 0.59
CTSB-222ENST00000531551 DEF6Q9H4E7 631 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 ARHGAP20Q9P2F6 1191 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 HESX1Q9UBX0 185 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 NOCTQ9UK39 431 aaKnown RBP18.73■□□□□ 0.59
CTSB-222ENST00000531551 PCDHB5Q9Y5E4 795 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 IRAK3Q9Y616 596 aa18.73■□□□□ 0.59
CTSB-222ENST00000531551 BZW2Q9Y6E2 419 aaKnown RBP18.73■□□□□ 0.59
CTSB-222ENST00000531551 M0QYV0 167 aa18.72■□□□□ 0.59
CTSB-222ENST00000531551 O00370 1275 aa18.72■□□□□ 0.59
CTSB-222ENST00000531551 PER2O15055 1255 aa18.72■□□□□ 0.59
CTSB-222ENST00000531551 MICAL2O94851 1124 aa18.72■□□□□ 0.59
CTSB-222ENST00000531551 ADH1AP07327 375 aa18.72■□□□□ 0.59
CTSB-222ENST00000531551 TNFAIP3P21580 790 aa18.72■□□□□ 0.59
CTSB-222ENST00000531551 BDNFP23560 247 aa18.72■□□□□ 0.59
CTSB-222ENST00000531551 CDR2Q01850 454 aa18.72■□□□□ 0.59
CTSB-222ENST00000531551 CNGA2Q16280 664 aa18.72■□□□□ 0.59
CTSB-222ENST00000531551 ZNF697Q5TEC3 545 aa18.72■□□□□ 0.59
CTSB-222ENST00000531551 SMYD5Q6GMV2 418 aa18.72■□□□□ 0.59
CTSB-222ENST00000531551 PDE12Q6L8Q7 609 aaKnown RBP18.72■□□□□ 0.59
CTSB-222ENST00000531551 ZNF571Q7Z3V5 609 aaPredicted RBP18.72■□□□□ 0.59
CTSB-222ENST00000531551 FUKQ8N0W3 1084 aa18.72■□□□□ 0.59
CTSB-222ENST00000531551 UBA3Q8TBC4 463 aa18.72■□□□□ 0.59
CTSB-222ENST00000531551 MTMR11A4FU01 709 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 SPATA31D3P0C874 917 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 ADCY1Q08828 1119 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 RAB33AQ14088 237 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 STILQ15468 1287 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 MEA1Q16626 185 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 ARHGAP17Q68EM7 881 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 SPATA31D4Q6ZUB0 917 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 FAM35AQ86V20 835 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 ZNF677Q86XU0 584 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 DDX1Q92499 740 aaKnown RBP18.71■□□□□ 0.59
CTSB-222ENST00000531551 HNRNPABQ99729 332 aaKnown RBP18.71■□□□□ 0.59
CTSB-222ENST00000531551 BAG1Q99933 345 aaPredicted RBP18.71■□□□□ 0.59
CTSB-222ENST00000531551 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.71■□□□□ 0.59
CTSB-222ENST00000531551 SLC27A5Q9Y2P5 690 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 CYP2F1P24903 491 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 EIF4A3P38919 411 aaKnown RBP18.71■□□□□ 0.59
CTSB-222ENST00000531551 GRIN2CQ14957 1233 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 LCLAT1Q6UWP7 414 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 PAQR9Q6ZVX9 377 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 ZNF461Q8TAF7 563 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 PPP1R9BQ96SB3 815 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 KRT82Q9NSB4 513 aa18.71■□□□□ 0.59
CTSB-222ENST00000531551 TRIOBPQ9H2D6 2365 aa18.71■□□□□ 0.58
CTSB-222ENST00000531551 ATP8B3O60423 1300 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 TMEM265A0A087WTH1 108 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 TGM5O43548 720 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 AP1G2O75843 785 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 FAM200BP0CF97 657 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 CHRNB2P17787 502 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 ELF1P32519 619 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 FMO1Q01740 532 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 DUSP4Q13115 394 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 MGAT5BQ3V5L5 792 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 DENND1BQ6P3S1 775 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 CYP26C1Q6V0L0 522 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 ADGRD2Q7Z7M1 963 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 VPS36Q86VN1 386 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 SCN4BQ8IWT1 228 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 MRPL38Q96DV4 380 aaKnown RBP18.7■□□□□ 0.58
CTSB-222ENST00000531551 CCDC42Q96M95 316 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 SEPT5Q99719 369 aaPredicted RBP18.7■□□□□ 0.58
CTSB-222ENST00000531551 NHEJ1Q9H9Q4 299 aaPredicted RBP18.7■□□□□ 0.58
CTSB-222ENST00000531551 CYP4F11Q9HBI6 524 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 ADAMTS1Q9UHI8 967 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 CEP83Q9Y592 693 aa18.7■□□□□ 0.58
CTSB-222ENST00000531551 GRIK1P39086 918 aa18.69■□□□□ 0.58
CTSB-222ENST00000531551 MAP3K7CLP57077 242 aa18.69■□□□□ 0.58
CTSB-222ENST00000531551 SLC8A3P57103 927 aa18.69■□□□□ 0.58
CTSB-222ENST00000531551 SMARCB1Q12824 385 aa18.69■□□□□ 0.58
CTSB-222ENST00000531551 TPGS2Q68CL5 300 aa18.69■□□□□ 0.58
CTSB-222ENST00000531551 TTC30AQ86WT1 665 aa18.69■□□□□ 0.58
CTSB-222ENST00000531551 LRRC8AQ8IWT6 810 aa18.69■□□□□ 0.58
CTSB-222ENST00000531551 ANKRD52Q8NB46 1076 aa18.69■□□□□ 0.58
CTSB-222ENST00000531551 SPPL2BQ8TCT7 592 aa18.69■□□□□ 0.58
CTSB-222ENST00000531551 SMARCD1Q96GM5 515 aa18.69■□□□□ 0.58
CTSB-222ENST00000531551 TLE6Q9H808 572 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms