RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 SHC4Q6S5L8 630 aa5.86□□□□□ -1.47
PTPRK-220ENST00000531466 KRT26Q7Z3Y9 468 aa5.86□□□□□ -1.47
PTPRK-220ENST00000531466 FAM46DQ8NEK8 389 aa5.86□□□□□ -1.47
PTPRK-220ENST00000531466 FAXDC2Q96IV6 333 aa5.86□□□□□ -1.47
PTPRK-220ENST00000531466 ZC3H10Q96K80 434 aaKnown RBP5.86□□□□□ -1.47
PTPRK-220ENST00000531466 SH2B3Q9UQQ2 575 aa5.86□□□□□ -1.47
PTPRK-220ENST00000531466 VIL1P09327 827 aaKnown RBP5.85□□□□□ -1.47
PTPRK-220ENST00000531466 HSD3B2P26439 372 aa5.85□□□□□ -1.47
PTPRK-220ENST00000531466 MIDNQ504T8 468 aa5.85□□□□□ -1.47
PTPRK-220ENST00000531466 PARS2Q7L3T8 475 aaKnown RBP5.85□□□□□ -1.47
PTPRK-220ENST00000531466 FAM90A1Q86YD7 464 aa5.85□□□□□ -1.47
PTPRK-220ENST00000531466 TNPO1Q92973 898 aaKnown RBP5.85□□□□□ -1.47
PTPRK-220ENST00000531466 R3HDM4Q96D70 268 aa5.85□□□□□ -1.47
PTPRK-220ENST00000531466 DAZAP1Q96EP5 407 aaKnown RBP5.85□□□□□ -1.47
PTPRK-220ENST00000531466 TEKT5Q96M29 485 aa5.85□□□□□ -1.47
PTPRK-220ENST00000531466 SLC46A1Q96NT5 459 aa5.85□□□□□ -1.47
PTPRK-220ENST00000531466 TTYH3Q9C0H2 523 aa5.85□□□□□ -1.47
PTPRK-220ENST00000531466 SLC5A4Q9NY91 659 aa5.85□□□□□ -1.47
PTPRK-220ENST00000531466 CCNL1Q9UK58 526 aaPredicted RBP5.85□□□□□ -1.47
PTPRK-220ENST00000531466 PCDHA3Q9Y5H8 950 aa5.85□□□□□ -1.47
PTPRK-220ENST00000531466 PDE8BO95263 885 aa5.84□□□□□ -1.47
PTPRK-220ENST00000531466 GNAI2P04899 355 aa5.84□□□□□ -1.47
PTPRK-220ENST00000531466 ATP5F1P24539 256 aaPredicted RBP5.84□□□□□ -1.47
PTPRK-220ENST00000531466 ABCB5Q2M3G0 1257 aa5.84□□□□□ -1.47
PTPRK-220ENST00000531466 FAM160B1Q5W0V3 765 aa5.84□□□□□ -1.47
PTPRK-220ENST00000531466 SFRP4Q6FHJ7 346 aaPredicted RBP5.84□□□□□ -1.47
PTPRK-220ENST00000531466 KIRREL2Q6UWL6 708 aa5.84□□□□□ -1.47
PTPRK-220ENST00000531466 MRPL10Q7Z7H8 261 aaKnown RBP5.84□□□□□ -1.47
PTPRK-220ENST00000531466 NSMCE1Q8WV22 266 aa5.84□□□□□ -1.47
PTPRK-220ENST00000531466 ATG4AQ8WYN0 398 aa5.84□□□□□ -1.47
PTPRK-220ENST00000531466 GLG1Q92896 1179 aa5.84□□□□□ -1.47
PTPRK-220ENST00000531466 SSX2IPQ9Y2D8 614 aa5.84□□□□□ -1.47
PTPRK-220ENST00000531466 CACNA1IQ9P0X4 2223 aa5.84□□□□□ -1.47
PTPRK-220ENST00000531466 DCLK1O15075 740 aa5.83□□□□□ -1.48
PTPRK-220ENST00000531466 EXOC3O60645 756 aa5.83□□□□□ -1.48
PTPRK-220ENST00000531466 FGBP02675 491 aa5.83□□□□□ -1.48
PTPRK-220ENST00000531466 MYBL2P10244 700 aa5.83□□□□□ -1.48
PTPRK-220ENST00000531466 IL1R2P27930 398 aa5.83□□□□□ -1.48
PTPRK-220ENST00000531466 GTF2H3Q13889 308 aa5.83□□□□□ -1.48
PTPRK-220ENST00000531466 CERKLQ49MI3 558 aaPredicted RBP5.83□□□□□ -1.48
PTPRK-220ENST00000531466 ARHGAP40Q5TG30 622 aa5.83□□□□□ -1.48
PTPRK-220ENST00000531466 KIAA1161Q6NSJ0 714 aa5.83□□□□□ -1.48
PTPRK-220ENST00000531466 LAYNQ6UX15 382 aa5.83□□□□□ -1.48
PTPRK-220ENST00000531466 C3orf20Q8ND61 904 aa5.83□□□□□ -1.48
PTPRK-220ENST00000531466 PIGOQ8TEQ8 1089 aa5.83□□□□□ -1.48
PTPRK-220ENST00000531466 XAGE5Q8WWM1 108 aa5.83□□□□□ -1.48
PTPRK-220ENST00000531466 PUS7LQ9H0K6 701 aaKnown RBP5.83□□□□□ -1.48
PTPRK-220ENST00000531466 GLOD4Q9HC38 313 aa5.83□□□□□ -1.48
PTPRK-220ENST00000531466 HESX1Q9UBX0 185 aa5.83□□□□□ -1.48
PTPRK-220ENST00000531466 SCAF8Q9UPN6 1271 aaKnown RBP5.83□□□□□ -1.48
PTPRK-220ENST00000531466 A1L4Q6 167 aa5.82□□□□□ -1.48
PTPRK-220ENST00000531466 PRR23D1E9PI22 279 aaPredicted RBP5.82□□□□□ -1.48
PTPRK-220ENST00000531466 POC1B-GALNT4F8VUJ3 575 aa5.82□□□□□ -1.48
PTPRK-220ENST00000531466 H7C1Q1 480 aa5.82□□□□□ -1.48
PTPRK-220ENST00000531466 ADAM10O14672 748 aa5.82□□□□□ -1.48
PTPRK-220ENST00000531466 USP1O94782 785 aa5.82□□□□□ -1.48
PTPRK-220ENST00000531466 PRR23D2P0DMB1 279 aaPredicted RBP5.82□□□□□ -1.48
PTPRK-220ENST00000531466 CYP2A6P11509 494 aaPredicted RBP5.82□□□□□ -1.48
PTPRK-220ENST00000531466 FXR1P51114 621 aaKnown RBP eCLIP5.82□□□□□ -1.48
PTPRK-220ENST00000531466 GPSM2P81274 684 aa5.82□□□□□ -1.48
PTPRK-220ENST00000531466 Q6ZWC4 215 aa5.82□□□□□ -1.48
PTPRK-220ENST00000531466 MEPCEQ7L2J0 689 aaKnown RBP5.82□□□□□ -1.48
PTPRK-220ENST00000531466 GALNT4Q8N4A0 578 aa5.82□□□□□ -1.48
PTPRK-220ENST00000531466 RP9Q8TA86 221 aaKnown RBP5.82□□□□□ -1.48
PTPRK-220ENST00000531466 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.82□□□□□ -1.48
PTPRK-220ENST00000531466 WWOXQ9NZC7 414 aa5.82□□□□□ -1.48
PTPRK-220ENST00000531466 TLDC2A0PJX2 215 aa5.81□□□□□ -1.48
PTPRK-220ENST00000531466 FCHO1O14526 889 aa5.81□□□□□ -1.48
PTPRK-220ENST00000531466 FTH1P19P0C7X4 201 aa5.81□□□□□ -1.48
PTPRK-220ENST00000531466 SCP2P22307 547 aa5.81□□□□□ -1.48
PTPRK-220ENST00000531466 TPTEP56180 551 aa5.81□□□□□ -1.48
PTPRK-220ENST00000531466 ZNF268Q14587 947 aaPredicted RBP5.81□□□□□ -1.48
PTPRK-220ENST00000531466 PCBP2Q15366 365 aaKnown RBP eCLIP5.81□□□□□ -1.48
PTPRK-220ENST00000531466 CPA6Q8N4T0 437 aa5.81□□□□□ -1.48
PTPRK-220ENST00000531466 C16orf52Q8NHV5 167 aa5.81□□□□□ -1.48
PTPRK-220ENST00000531466 DDX17Q92841 729 aaKnown RBP5.81□□□□□ -1.48
PTPRK-220ENST00000531466 FAM118BQ9BPY3 351 aa5.81□□□□□ -1.48
PTPRK-220ENST00000531466 ABCF2Q9UG63 623 aa5.81□□□□□ -1.48
PTPRK-220ENST00000531466 ZDHHC8Q9ULC8 765 aa5.81□□□□□ -1.48
PTPRK-220ENST00000531466 AHSGP02765 367 aa5.8□□□□□ -1.48
PTPRK-220ENST00000531466 PIM1P11309 404 aaPredicted RBP5.8□□□□□ -1.48
PTPRK-220ENST00000531466 PPIFP30405 207 aaKnown RBP5.8□□□□□ -1.48
PTPRK-220ENST00000531466 LOXL3P58215 753 aa5.8□□□□□ -1.48
PTPRK-220ENST00000531466 LILRA4P59901 499 aa5.8□□□□□ -1.48
PTPRK-220ENST00000531466 LONRF3Q496Y0 759 aa5.8□□□□□ -1.48
PTPRK-220ENST00000531466 RGS7BPQ6MZT1 257 aaPredicted RBP5.8□□□□□ -1.48
PTPRK-220ENST00000531466 SERPINA13PQ6UXR4 307 aa5.8□□□□□ -1.48
PTPRK-220ENST00000531466 HEATR3Q7Z4Q2 680 aa5.8□□□□□ -1.48
PTPRK-220ENST00000531466 TERB1Q8NA31 727 aa5.8□□□□□ -1.48
PTPRK-220ENST00000531466 ABHD11Q8NFV4 315 aa5.8□□□□□ -1.48
PTPRK-220ENST00000531466 COQ8BQ96D53 544 aa5.8□□□□□ -1.48
PTPRK-220ENST00000531466 MRPL46Q9H2W6 279 aaKnown RBP5.8□□□□□ -1.48
PTPRK-220ENST00000531466 POLHQ9Y253 713 aa5.8□□□□□ -1.48
PTPRK-220ENST00000531466 MRFAP1Q9Y605 127 aa5.8□□□□□ -1.48
PTPRK-220ENST00000531466 PRF1P14222 555 aa5.79□□□□□ -1.48
PTPRK-220ENST00000531466 PXNP49023 591 aaPredicted RBP5.79□□□□□ -1.48
PTPRK-220ENST00000531466 NOGQ13253 232 aa5.79□□□□□ -1.48
PTPRK-220ENST00000531466 RBMS2Q15434 407 aaKnown RBP5.79□□□□□ -1.48
PTPRK-220ENST00000531466 TRIM71Q2Q1W2 868 aaKnown RBP5.79□□□□□ -1.48
PTPRK-220ENST00000531466 L1TD1Q5T7N2 865 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms