RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 FSTL4Q6MZW2 842 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 WDR5BQ86VZ2 330 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 CCDC65Q8IXS2 484 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 ADGRF2Q8IZF7 708 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 GPD1LQ8N335 351 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 TOP6BLQ8N6T0 577 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 SPRYD3Q8NCJ5 442 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 RIN3Q8TB24 985 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 SPATA18Q8TC71 538 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 CHFRQ96EP1 664 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 TRMT2BQ96GJ1 504 aaKnown RBP13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 MYRFLQ96LU7 910 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 MTMR12Q9C0I1 747 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 EBF3Q9H4W6 596 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 UXTQ9UBK9 157 aaPredicted RBP13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 TSC2P49815 1807 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 DCDC2BA2VCK2 349 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 TRDMT1O14717 391 aaKnown RBP13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 KIAA0391O15091 583 aaKnown RBP13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 HCRTO43612 131 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 TADA3O75528 432 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 ARSAP15289 507 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 PCSK1P29120 753 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 LHX1P48742 406 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 GRSF1Q12849 480 aaKnown RBP eCLIP13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 PDGFRLQ15198 375 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 CSRP2Q16527 193 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 SOWAHAQ2M3V2 549 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 CFAP221Q4G0U5 840 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 LMBRD2Q68DH5 695 aaPredicted RBP13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 CC2D1AQ6P1N0 951 aaPredicted RBP13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 PKN3Q6P5Z2 889 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 CEP68Q76N32 757 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 LIMS2Q7Z4I7 341 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 SPATA2LQ8IUW3 424 aaPredicted RBP13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 PDILTQ8N807 584 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 GLIS3Q8NEA6 775 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 OR5B17Q8NGF7 314 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 RTKNQ9BST9 563 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 ZSCAN16Q9H4T2 348 aaPredicted RBP13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 FBRSL1Q9HCM7 1045 aaKnown RBP13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 SEMA4GQ9NTN9 838 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 INTS13Q9NVM9 706 aa13.74□□□□□ -0.21
TM9SF1-211ENST00000531406 PTPRJQ12913 1337 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 ZNF233A6NK53 670 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 ATP2C2O75185 946 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 HOXD13P35453 343 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 MAGEA11P43364 429 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 NASPP49321 788 aaPredicted RBP13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 AMPD2Q01433 879 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 MYO1EQ12965 1108 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 DUOXA2Q1HG44 320 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 FAM171BQ6P995 826 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 STXBP4Q6ZWJ1 553 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 DPH6Q7L8W6 267 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 SCN4BQ8IWT1 228 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 FAM160A2Q8N612 972 aaPredicted RBP13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 HPS3Q969F9 1004 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 FUBP3Q96I24 572 aaKnown RBP eCLIP13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 HPDLQ96IR7 371 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 ANKRD36BP1Q96IX9 119 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 CYP2S1Q96SQ9 504 aa13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 R3HCC1Q9Y3T6 440 aaKnown RBP13.73□□□□□ -0.21
TM9SF1-211ENST00000531406 TRAV19A0A0A6YYK7 116 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 STX6O43752 255 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 ATG13O75143 517 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 EGFP01133 1207 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 TNNC2P02585 160 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 CKMP06732 381 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 USP17L7P0C7H9 530 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 LMO2P25791 158 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 PXNP49023 591 aaPredicted RBP13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 GALK1P51570 392 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 FAM160A1Q05DH4 1040 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 MTF1Q14872 753 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 STK38Q15208 465 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 SURF1Q15526 300 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 E2F4Q16254 413 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 CBWD2Q8IUF1 395 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 LINC00301Q8NCQ3 95 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 NETO1Q8TDF5 533 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 KBTBD7Q8WVZ9 684 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 SLC22A12Q96S37 553 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 SYT15Q9BQS2 421 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 LRRC27Q9C0I9 530 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 TNMDQ9H2S6 317 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 KIAA1586Q9HCI6 787 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 TRPC7Q9HCX4 862 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 KBTBD4Q9NVX7 518 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 CIZ1Q9ULV3 898 aaPredicted RBP13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 SLC8A2Q9UPR5 921 aa13.72□□□□□ -0.21
TM9SF1-211ENST00000531406 SCN1AP35498 2009 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 CCDC163A0A0D9SF12 145 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 SLC30A4O14863 429 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 RNF40O75150 1001 aa13.71□□□□□ -0.21
TM9SF1-211ENST00000531406 PDIA4P13667 645 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms