RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 MSTO1Q9BUK6 570 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 CCSER1Q9C0I3 900 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 RPF1Q9H9Y2 349 aaKnown RBP9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 LARSQ9P2J5 1176 aaKnown RBP9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 ODF2LQ9ULJ1 636 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 LNP1A1A4G5 178 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 CYB561D2O14569 222 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 XPOTO43592 962 aaKnown RBP9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 HCRTO43612 131 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 AKAP3O75969 853 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 TOP3BO95985 862 aaKnown RBP9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 CCDC192P0DO97 292 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 CHRM1P11229 460 aaPredicted RBP9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 ADSSP30520 456 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 GJA4P35212 333 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 TUFMP49411 452 aaKnown RBP9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 GALK1P51570 392 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 ZXDBP98169 803 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 GTF2BQ00403 316 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 GRSF1Q12849 480 aaKnown RBP eCLIP9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 C19orf48Q6RUI8 117 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 PDZD3Q86UT5 571 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 GPBP1Q86WP2 473 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 LURAP1LQ8IV03 231 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 FAM184AQ8NB25 1140 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 RPLP0P6Q8NHW5 317 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 SPPL2BQ8TCT7 592 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 TSPAN18Q96SJ8 248 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 CYP2S1Q96SQ9 504 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 FOXD4L1Q9NU39 408 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 TDP1Q9NUW8 608 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 ABI2Q9NYB9 513 aaPredicted RBP9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 DACH1Q9UI36 760 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 DERAQ9Y315 318 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 PCDHGA5Q9Y5G8 931 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 STYXL1Q9Y6J8 313 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 LOC400499M0QZD8 3231 aa9.92□□□□□ -0.82
CHMP4A-205ENST00000531158 IGSF10Q6WRI0 2623 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 HELZ2Q9BYK8 2649 aaKnown RBP9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 AVPR1AP37288 418 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 TAF6P49848 677 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 NOVA1P51513 510 aaKnown RBP9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 KCNA1Q09470 495 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 MESP2Q0VG99 397 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 USP4Q13107 963 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 DHX8Q14562 1220 aaKnown RBP9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 MCM6Q14566 821 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 VEPH1Q14D04 833 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 ZNF77Q15935 545 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 KYAT1Q16773 422 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 DDR2Q16832 855 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 GAB4Q2WGN9 574 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 RILPL1Q5EBL4 403 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 SYT13Q7L8C5 426 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 MON1AQ86VX9 555 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 OSTM1Q86WC4 334 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 CD302Q8IX05 232 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 CAMKK1Q8N5S9 505 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 KCTD17Q8N5Z5 321 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 MYCT1Q8N699 235 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 C2orf15Q8WU43 125 aaKnown RBP9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 P2RY13Q9BPV8 354 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 PI4K2AQ9BTU6 479 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 SCNM1Q9BWG6 230 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 ASB7Q9H672 318 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 GRPEL1Q9HAV7 217 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 PARVGQ9HBI0 331 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 VPS45Q9NRW7 570 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 THG1LQ9NWX6 298 aaKnown RBP9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 DPP3Q9NY33 737 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 L1RE1Q9UN81 338 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 SLC8A2Q9UPR5 921 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 C2CD2Q9Y426 696 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 WNT6Q9Y6F9 365 aa9.91□□□□□ -0.82
CHMP4A-205ENST00000531158 BPTFQ12830 3046 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 MYH10P35580 1976 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 BCLAF3A2AJT9 711 aaKnown RBP9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 C4orf47A7E2U8 309 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 KPNA7A9QM74 516 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 PATE3B3GLJ2 98 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 H0YCG3 227 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 ATG13O75143 517 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 PPP1R37O75864 691 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 NOL4O94818 638 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 HNRNPLP14866 589 aaKnown RBP eCLIP9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 PLCG1P19174 1290 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 BCKDHBP21953 392 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 ACAT1P24752 427 aaKnown RBP9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 CYP2F1P24903 491 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 ZNF445P59923 1031 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 CREB5Q02930 508 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 ZNF252P-AS1Q0IIN9 211 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 BFSP1Q12934 665 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 DMC1Q14565 340 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 ZNF268Q14587 947 aaPredicted RBP9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 MTF1Q14872 753 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 KARSQ15046 597 aaKnown RBP9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 EML3Q32P44 896 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 ARL6IP4Q66PJ3 421 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms