RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 SLC10A6Q3KNW5 377 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 SEL1L2Q5TEA6 688 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 NAA35Q5VZE5 725 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 FAM43BQ6ZT52 329 aaPredicted RBP8.7□□□□□ -1.02
CMTM1-214ENST00000530141 RPAINQ86UA6 219 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 MCOLN2Q8IZK6 566 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 LRRC52Q8N7C0 313 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 C1orf127Q8N9H9 656 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 LRRN4CLQ8ND94 238 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 COG1Q8WTW3 980 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 DNAJB3Q8WWF6 145 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.7□□□□□ -1.02
CMTM1-214ENST00000530141 ZNF668Q96K58 619 aaPredicted RBP8.7□□□□□ -1.02
CMTM1-214ENST00000530141 ZNF560Q96MR9 790 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 PPP1R16BQ96T49 567 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 OSMRQ99650 979 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 NUP85Q9BW27 656 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 SEZ6LQ9BYH1 1024 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 BCO2Q9BYV7 579 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 XYLT2Q9H1B5 865 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 MTIF3Q9H2K0 278 aaKnown RBP8.7□□□□□ -1.02
CMTM1-214ENST00000530141 CHST12Q9NRB3 414 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 TRMT13Q9NUP7 481 aaKnown RBP8.7□□□□□ -1.02
CMTM1-214ENST00000530141 DPP3Q9NY33 737 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 TAS2R14Q9NYV8 317 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 STRIP2Q9ULQ0 834 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 UBQLN1Q9UMX0 589 aaKnown RBP8.7□□□□□ -1.02
CMTM1-214ENST00000530141 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.7□□□□□ -1.02
CMTM1-214ENST00000530141 MYO1FO00160 1098 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 ZNF185O15231 689 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 TREHO43280 583 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 SPOPO43791 374 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 CAND2O75155 1236 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 CST3P01034 146 aaPredicted RBP8.69□□□□□ -1.02
CMTM1-214ENST00000530141 ITGB3P05106 788 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 NFICP08651 508 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 FAM163BP0C2L3 166 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 RHOXF2BP0C7M4 288 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 VDRP11473 427 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 CYP3A5P20815 502 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 KCNA5P22460 613 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 CDH5P33151 784 aaPredicted RBP8.69□□□□□ -1.02
CMTM1-214ENST00000530141 MAN1A1P33908 653 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 CETN2P41208 172 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 ASPAP45381 313 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 MRPS6P82932 125 aaKnown RBP8.69□□□□□ -1.02
CMTM1-214ENST00000530141 ITGA7Q13683 1181 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 C8orf74Q6P047 294 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 RUFY4Q6ZNE9 571 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 GJD3Q8N144 294 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 RASGEF1CQ8N431 466 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 CEP120Q8N960 986 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 CCDC26Q8TAB7 109 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.69□□□□□ -1.02
CMTM1-214ENST00000530141 ZNF606Q8WXB4 792 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 ARHGEF26Q96DR7 871 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 ZBTB10Q96DT7 871 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 HPDLQ96IR7 371 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 RHOXF2Q9BQY4 288 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 CELF4Q9BZC1 486 aaKnown RBP8.69□□□□□ -1.02
CMTM1-214ENST00000530141 LHX5Q9H2C1 402 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 ANKZF1Q9H8Y5 726 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 OSGEPQ9NPF4 335 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 PARVAQ9NVD7 372 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 FAM86C1Q9NVL1 165 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 ADAM22Q9P0K1 906 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 CNTN3Q9P232 1028 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 WDR35Q9P2L0 1181 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 NXF1Q9UBU9 619 aaKnown RBP8.69□□□□□ -1.02
CMTM1-214ENST00000530141 GTF2IRD1Q9UHL9 959 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 COG5Q9UP83 839 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 AGAP1Q9UPQ3 857 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 PIN4Q9Y237 131 aaKnown RBP8.69□□□□□ -1.02
CMTM1-214ENST00000530141 GINS2Q9Y248 185 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 PCDHB3Q9Y5E6 796 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 ALG6Q9Y672 507 aa8.69□□□□□ -1.02
CMTM1-214ENST00000530141 TRIP12Q14669 1992 aaPredicted RBP8.68□□□□□ -1.02
CMTM1-214ENST00000530141 GPR182O15218 404 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 DDX3YO15523 660 aaKnown RBP8.68□□□□□ -1.02
CMTM1-214ENST00000530141 SKIP12755 728 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 KCNE1P15382 129 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 DESP17661 470 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 PAX3P23760 479 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 TNFRSF8P28908 595 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 HOXA11P31270 313 aaPredicted RBP8.68□□□□□ -1.02
CMTM1-214ENST00000530141 RWDD2BP57060 319 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 COPS2P61201 443 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 C2orf54Q08AI8 447 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 MESDQ14696 234 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 WDR72Q3MJ13 1102 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 CC2D1AQ6P1N0 951 aaPredicted RBP8.68□□□□□ -1.02
CMTM1-214ENST00000530141 HFE2Q6ZVN8 426 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 MON1BQ7L1V2 547 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 HDXQ7Z353 690 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 MAATS1Q7Z4T9 603 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 UNC93AQ86WB7 457 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 CDR2LQ86X02 465 aaPredicted RBP8.68□□□□□ -1.02
CMTM1-214ENST00000530141 PALB2Q86YC2 1186 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 IFT20Q8IY31 132 aa8.68□□□□□ -1.02
CMTM1-214ENST00000530141 EIF1ADQ8N9N8 165 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms