RNA–Protein interactions for RNA: ENST00000529923.1

UBQLN1-205, Transcript of ubiquilin 1, humanhuman

TSL 2

Gene UBQLN1, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-205ENST00000529923 SAE1Q9UBE0 346 aaPredicted RBP3.12□□□□□ -1.91
UBQLN1-205ENST00000529923 HECAQ9UBI9 543 aaPredicted RBP3.12□□□□□ -1.91
UBQLN1-205ENST00000529923 REXO2Q9Y3B8 237 aaKnown RBP3.12□□□□□ -1.91
UBQLN1-205ENST00000529923 SH3BP1Q9Y3L3 701 aa3.12□□□□□ -1.91
UBQLN1-205ENST00000529923 CTDP1Q9Y5B0 961 aaPredicted RBP3.12□□□□□ -1.91
UBQLN1-205ENST00000529923 ELP1O95163 1332 aa3.12□□□□□ -1.91
UBQLN1-205ENST00000529923 SYNRGQ9UMZ2 1314 aa3.12□□□□□ -1.91
UBQLN1-205ENST00000529923 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 KRTAP23-1A1A580 65 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 C2orf78A6NCI8 922 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 GOLGA8BA8MQT2 603 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 RAB11FIP3O75154 756 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 MAFO75444 373 aaPredicted RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 KRT37O76014 449 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 ASGR1P07306 291 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 CSF2RAP15509 400 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 COPB2P35606 906 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 OAZ1P54368 228 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 ANTXR2P58335 489 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 CNTN2Q02246 1040 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 FPGSQ05932 587 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 SERINC3Q13530 473 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 ACVR2BQ13705 512 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 PLS1Q14651 629 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 KCTD2Q14681 263 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 CCDC144BQ3MJ40 725 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 TMEM177Q53S58 311 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 HSP90AB4PQ58FF6 505 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 TAPT1Q6NXT6 567 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 CC2D1AQ6P1N0 951 aaPredicted RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 GIMAP6Q6P9H5 292 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 ABHD17CQ6PCB6 329 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 ZNF365Q70YC5 407 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 BRAPQ7Z569 592 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 FGD2Q7Z6J4 655 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 RTN4RL1Q86UN2 441 aaPredicted RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 GSPT2Q8IYD1 628 aaKnown RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 ANKRD35Q8N283 1001 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 CLASRPQ8N2M8 674 aaKnown RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 PRPF38AQ8NAV1 312 aaKnown RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 GMCL1P1Q8NEA9 526 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 ZSWIM2Q8NEG5 633 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 MORC4Q8TE76 937 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 ZNF483Q8TF39 744 aaPredicted RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 ATXN2LQ8WWM7 1075 aaKnown RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 HERVK_113Q902F9 699 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 LARP4BQ92615 738 aaKnown RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 GCDHQ92947 438 aaPredicted RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 GFM2Q969S9 779 aaKnown RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 E2F7Q96AV8 911 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 FOXRED1Q96CU9 486 aaPredicted RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 RPL10LQ96L21 214 aaKnown RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 ASB2Q96Q27 587 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 SRPK1Q96SB4 655 aaKnown RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 DNAJC2Q99543 621 aaKnown RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 FOXB1Q99853 325 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 SLF1Q9BQI6 1058 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 TEX13BQ9BXU2 312 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 MRPL4Q9BYD3 311 aaKnown RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 SLC6A15Q9H2J7 730 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 SH2D4AQ9H788 454 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 RAVER2Q9HCJ3 691 aaKnown RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 STARD7Q9NQZ5 370 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 SLC2A4RGQ9NR83 387 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 SNTG2Q9NY99 539 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 MTMR4Q9NYA4 1195 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 CEP72Q9P209 647 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 SFMBT1Q9UHJ3 866 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 SYNPO2Q9UMS6 1093 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 RBM8AQ9Y5S9 174 aaKnown RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 SLC4A4Q9Y6R1 1079 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 DDX49Q9Y6V7 483 aaKnown RBP3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 MUC3AQ02505 3323 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 SPEF2Q9C093 1822 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 EYSQ5T1H1 3165 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 UMODL1Q5DID0 1318 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 DNAH12Q6ZR08 3092 aa3.11□□□□□ -1.91
UBQLN1-205ENST00000529923 PRUNE2Q8WUY3 3088 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 A0A0U1RQG5 324 aaPredicted RBP3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 EPOPA6NHQ4 379 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 M0R2C6 588 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 PLA2G6O60733 806 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 PRDM1O75626 825 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 IFIT2P09913 472 aaKnown RBP3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 POU3F3P20264 500 aaPredicted RBP3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 CYP2C18P33260 490 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 KIF11P52732 1056 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 BEX3Q00994 111 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 SLC6A3Q01959 620 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 PPIGQ13427 754 aaKnown RBP eCLIP3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 GPNMBQ14956 572 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 DGKDQ16760 1214 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 ARHGAP44Q17R89 818 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 C20orf194Q5TEA3 1177 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 SNRNP48Q6IEG0 339 aaKnown RBP3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 FAM111BQ6SJ93 734 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 CXCL17Q6UXB2 119 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 GAREM2Q75VX8 874 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 ARMCX2Q7L311 632 aa3.1□□□□□ -1.91
UBQLN1-205ENST00000529923 FTSJ3Q8IY81 847 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms