RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 EPC1Q9H2F5 836 aa12.4□□□□□ -0.42
SRPRA-203ENST00000528744 EBF3Q9H4W6 596 aa12.4□□□□□ -0.42
SRPRA-203ENST00000528744 C8orf33Q9H7E9 229 aaPredicted RBP12.4□□□□□ -0.42
SRPRA-203ENST00000528744 AGPAT3Q9NRZ7 376 aa12.4□□□□□ -0.42
SRPRA-203ENST00000528744 TMEM30AQ9NV96 361 aa12.4□□□□□ -0.42
SRPRA-203ENST00000528744 ITGA11Q9UKX5 1188 aa12.4□□□□□ -0.42
SRPRA-203ENST00000528744 CEP250Q9BV73 2442 aa12.4□□□□□ -0.42
SRPRA-203ENST00000528744 FANCMQ8IYD8 2048 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 MED19A0JLT2 244 aaPredicted RBP12.39□□□□□ -0.43
SRPRA-203ENST00000528744 ZNF233A6NK53 670 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 DPYSL4O14531 572 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 KLRC4O43908 158 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 YEATS4O95619 227 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 CXCL12P48061 93 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 CACNA2D1P54289 1103 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 ASIC1P78348 528 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 TSPY1Q01534 308 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 ALCAMQ13740 583 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 VEPH1Q14D04 833 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 ARHGAP15Q53QZ3 475 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 FSTL4Q6MZW2 842 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 TRAPPC11Q7Z392 1133 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 MON1AQ86VX9 555 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 RALGPS2Q86X27 583 aaPredicted RBP12.39□□□□□ -0.43
SRPRA-203ENST00000528744 ADGRF2Q8IZF7 708 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 TMEM86AQ8N2M4 240 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 CELF5Q8N6W0 485 aaKnown RBP12.39□□□□□ -0.43
SRPRA-203ENST00000528744 LEO1Q8WVC0 666 aaPredicted RBP12.39□□□□□ -0.43
SRPRA-203ENST00000528744 EZH1Q92800 747 aaPredicted RBP12.39□□□□□ -0.43
SRPRA-203ENST00000528744 HPDLQ96IR7 371 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 MYRFLQ96LU7 910 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 LINC00597Q9H2U6 94 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 SLC39A2Q9NP94 309 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 GCNT4Q9P109 453 aa12.39□□□□□ -0.43
SRPRA-203ENST00000528744 SMG5Q9UPR3 1016 aaKnown RBP12.39□□□□□ -0.43
SRPRA-203ENST00000528744 C2orf78A6NCI8 922 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 FGF19O95750 216 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 F13A1P00488 732 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 TMEM191BP0C7N4 346 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 CSH1P0DML2 217 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 CSH2P0DML3 217 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 ZSCAN22P10073 491 aaPredicted RBP12.38□□□□□ -0.43
SRPRA-203ENST00000528744 BDNFP23560 247 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 AFMP43652 599 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 CASP4P49662 377 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 GALK1P51570 392 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 DNM1Q05193 864 aaKnown RBP12.38□□□□□ -0.43
SRPRA-203ENST00000528744 RUNX3Q13761 415 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 TAF12Q16514 161 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 NFE2Q16621 373 aaPredicted RBP12.38□□□□□ -0.43
SRPRA-203ENST00000528744 DUOXA2Q1HG44 320 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 FAM26FQ5R3K3 315 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 UNC13DQ70J99 1090 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 SCN4BQ8IWT1 228 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 SPEM1Q8N4L4 309 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 IQUBQ8NA54 791 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 MYLPFQ96A32 169 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 CCDC127Q96BQ5 260 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 ZNF396Q96N95 335 aaPredicted RBP12.38□□□□□ -0.43
SRPRA-203ENST00000528744 HINFPQ9BQA5 517 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 DPEP3Q9H4B8 488 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 TDP1Q9NUW8 608 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 DLL3Q9NYJ7 618 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 SERTAD1Q9UHV2 236 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 RCOR1Q9UKL0 485 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 ZDHHC9Q9Y397 364 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
SRPRA-203ENST00000528744 TSC2P49815 1807 aa12.38□□□□□ -0.43
SRPRA-203ENST00000528744 SDK1Q7Z5N4 2213 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 EIF3DO15371 548 aaKnown RBP eCLIP12.37□□□□□ -0.43
SRPRA-203ENST00000528744 EGFP01133 1207 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 DLATP10515 647 aaKnown RBP12.37□□□□□ -0.43
SRPRA-203ENST00000528744 WARSP23381 471 aaKnown RBP12.37□□□□□ -0.43
SRPRA-203ENST00000528744 LHX1P48742 406 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 PXNP49023 591 aaPredicted RBP12.37□□□□□ -0.43
SRPRA-203ENST00000528744 CYP2J2P51589 502 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 CCR3P51677 355 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 MYL7Q01449 175 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 CYP24A1Q07973 514 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 STK4Q13043 487 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 SNRNP35Q16560 246 aaKnown RBP12.37□□□□□ -0.43
SRPRA-203ENST00000528744 RSPO4Q2I0M5 234 aaPredicted RBP12.37□□□□□ -0.43
SRPRA-203ENST00000528744 ITPRIPL2Q3MIP1 535 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 CFAP221Q4G0U5 840 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 TMEM196Q5HYL7 178 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 RESP18Q5W5W9 173 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 HEATR6Q6AI08 1181 aaKnown RBP12.37□□□□□ -0.43
SRPRA-203ENST00000528744 DPH6Q7L8W6 267 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 ARL14EPQ8N8R7 260 aaPredicted RBP12.37□□□□□ -0.43
SRPRA-203ENST00000528744 ANKRD36BP1Q96IX9 119 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 SYT15Q9BQS2 421 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 XYLT2Q9H1B5 865 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 ABCB6Q9NP58 842 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 MIA3Q5JRA6 1907 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 TICRRQ7Z2Z1 1910 aa12.37□□□□□ -0.43
SRPRA-203ENST00000528744 TRDMT1O14717 391 aaKnown RBP12.36□□□□□ -0.43
SRPRA-203ENST00000528744 KIAA0391O15091 583 aaKnown RBP12.36□□□□□ -0.43
SRPRA-203ENST00000528744 PAPSS2O95340 614 aaPredicted RBP12.36□□□□□ -0.43
SRPRA-203ENST00000528744 ATXN1P54253 815 aaKnown RBP12.36□□□□□ -0.43
SRPRA-203ENST00000528744 CDH8P55286 799 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms