RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 UXTQ9UBK9 157 aaPredicted RBP9.71□□□□□ -0.86
CMTM1-210ENST00000528441 SIX4Q9UIU6 781 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 CDH9Q9ULB4 789 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 NDRG2Q9UN36 371 aaKnown RBP9.71□□□□□ -0.86
CMTM1-210ENST00000528441 MRPS17Q9Y2R5 130 aaKnown RBP9.71□□□□□ -0.86
CMTM1-210ENST00000528441 SIT1Q9Y3P8 196 aa9.71□□□□□ -0.86
CMTM1-210ENST00000528441 ZNF638Q14966 1978 aaKnown RBP9.71□□□□□ -0.86
CMTM1-210ENST00000528441 KRBA1A5PL33 1030 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 LRRIQ3A6PVS8 624 aaPredicted RBP9.7□□□□□ -0.86
CMTM1-210ENST00000528441 CETN3O15182 167 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 HCRTO43612 131 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 RHOBTB3O94955 611 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 PSMC3P17980 439 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 ATF6P18850 670 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 BDNFP23560 247 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 ATICP31939 592 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 RAP1GAPP47736 663 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 VAMP7P51809 220 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 NHLH1Q02575 133 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 PRKCQQ04759 706 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 EHHADHQ08426 723 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 DPYDQ12882 1025 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 ADAM9Q13443 819 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 SOWAHAQ2M3V2 549 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 STXBP5Q5T5C0 1151 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 ISM2Q6H9L7 571 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 CC2D1AQ6P1N0 951 aaPredicted RBP9.7□□□□□ -0.86
CMTM1-210ENST00000528441 ALYREFQ86V81 257 aaKnown RBP9.7□□□□□ -0.86
CMTM1-210ENST00000528441 LRRTM3Q86VH5 581 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 C12orf56Q8IXR9 622 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 SMYD4Q8IYR2 804 aaPredicted RBP9.7□□□□□ -0.86
CMTM1-210ENST00000528441 TTC8Q8TAM2 541 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 SPATA18Q8TC71 538 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 E2F7Q96AV8 911 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 BORCS6Q96GS4 357 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 ASB16Q96NS5 453 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 MRPL45Q9BRJ2 306 aaKnown RBP9.7□□□□□ -0.86
CMTM1-210ENST00000528441 PLA2G2FQ9BZM2 168 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 ZNF334Q9HCZ1 680 aaPredicted RBP9.7□□□□□ -0.86
CMTM1-210ENST00000528441 SLC2A4RGQ9NR83 387 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 HEBP1Q9NRV9 189 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 TMLHEQ9NVH6 421 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 SPATA6Q9NWH7 488 aaPredicted RBP9.7□□□□□ -0.86
CMTM1-210ENST00000528441 THG1LQ9NWX6 298 aaKnown RBP9.7□□□□□ -0.86
CMTM1-210ENST00000528441 HSFX1Q9UBD0 423 aa9.7□□□□□ -0.86
CMTM1-210ENST00000528441 ARIH1Q9Y4X5 557 aaPredicted RBP9.7□□□□□ -0.86
CMTM1-210ENST00000528441 KANSL1LA0AUZ9 987 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 MYBPHLA2RUH7 354 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 FAM170BA6NMN3 283 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 SLC38A8A6NNN8 435 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 TRIM66O15016 1216 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 ATP2C2O75185 946 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 MICAL2O94851 1124 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 PAPLNO95428 1278 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 VNN2O95498 520 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 CST3P01034 146 aaPredicted RBP9.69□□□□□ -0.86
CMTM1-210ENST00000528441 CKMP06732 381 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 TRIM49P0CI25 452 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 TRIM49CP0CI26 452 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 CD72P21854 359 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 WARSP23381 471 aaKnown RBP9.69□□□□□ -0.86
CMTM1-210ENST00000528441 PSMC2P35998 433 aaKnown RBP9.69□□□□□ -0.86
CMTM1-210ENST00000528441 FAM160A1Q05DH4 1040 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 KCNB1Q14721 858 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 MIA3Q5JRA6 1907 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 PPP1R15BQ5SWA1 713 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 TDRD10Q5VZ19 366 aaKnown RBP9.69□□□□□ -0.86
CMTM1-210ENST00000528441 KLHL10Q6JEL2 608 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 VITQ6UXI7 678 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 ZNF852Q6ZMS4 543 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 INTS8Q75QN2 995 aaKnown RBP9.69□□□□□ -0.86
CMTM1-210ENST00000528441 TMC8Q8IU68 726 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 ARID3BQ8IVW6 561 aaPredicted RBP9.69□□□□□ -0.86
CMTM1-210ENST00000528441 GUF1Q8N442 669 aaKnown RBP9.69□□□□□ -0.86
CMTM1-210ENST00000528441 MAB21L3Q8N8X9 362 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 DTWD2Q8NBA8 298 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 PTCD2Q8WV60 388 aaKnown RBP9.69□□□□□ -0.86
CMTM1-210ENST00000528441 ERCC4Q92889 916 aaPredicted RBP9.69□□□□□ -0.86
CMTM1-210ENST00000528441 TNIP3Q96KP6 325 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 ZSWIM3Q96MP5 696 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 NOTCH4Q99466 2003 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 HINFPQ9BQA5 517 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 NACA2Q9H009 215 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 SMG9Q9H0W8 520 aaKnown RBP9.69□□□□□ -0.86
CMTM1-210ENST00000528441 TASP1Q9H6P5 420 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 SMYD3Q9H7B4 428 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 EHD2Q9NZN4 543 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 PCDHGA4Q9Y5G9 962 aa9.69□□□□□ -0.86
CMTM1-210ENST00000528441 MYH10P35580 1976 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 TRAV19A0A0A6YYK7 116 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 MAN2B1O00754 1011 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 PSMA7O14818 248 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 LAMTOR5O43504 91 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 PI15O43692 258 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 STX10O60499 249 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 CD58P19256 250 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 LMO2P25791 158 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 DDX6P26196 483 aaKnown RBP eCLIP9.68□□□□□ -0.86
CMTM1-210ENST00000528441 GCLMP48507 274 aa9.68□□□□□ -0.86
CMTM1-210ENST00000528441 EPHA5P54756 1037 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms