RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 GRAMD1CQ8IYS0 662 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 SHKBP1Q8TBC3 707 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 TMC2Q8TDI7 906 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 PARD3BQ8TEW8 1205 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 TAF4BQ92750 862 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 ZSWIM3Q96MP5 696 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 DDX23Q9BUQ8 820 aaKnown RBP10.28□□□□□ -0.76
CHD7-208ENST00000528280 DNAJC25Q9H1X3 360 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 CRISPLD1Q9H336 500 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 KCTD10Q9H3F6 313 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 SEMA4AQ9H3S1 761 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 GTF3C4Q9UKN8 822 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 FANCMQ8IYD8 2048 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 NOTCH4Q99466 2003 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 FAM170BA6NMN3 283 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 HEPACAM2A8MVW5 462 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 SMC2O95347 1197 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 NR3C1P04150 777 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 GDI1P31150 447 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 PPP3CCP48454 512 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 PDE6CP51160 858 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 PLCB2Q00722 1185 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 DPYDQ12882 1025 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 BIRC3Q13489 604 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 ARHGAP29Q52LW3 1261 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 GPR158Q5T848 1215 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 LMBRD2Q68DH5 695 aaPredicted RBP10.27□□□□□ -0.77
CHD7-208ENST00000528280 GAREM2Q75VX8 874 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 GUF1Q8N442 669 aaKnown RBP10.27□□□□□ -0.77
CHD7-208ENST00000528280 CELF5Q8N6W0 485 aaKnown RBP10.27□□□□□ -0.77
CHD7-208ENST00000528280 KIAA0895Q8NCT3 520 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 PJA1Q8NG27 643 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 CSGALNACT1Q8TDX6 532 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 GIPC2Q8TF65 315 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 MRPS31Q92665 395 aaKnown RBP10.27□□□□□ -0.77
CHD7-208ENST00000528280 TRMT2BQ96GJ1 504 aaKnown RBP10.27□□□□□ -0.77
CHD7-208ENST00000528280 SPATA17Q96L03 361 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 MYRFLQ96LU7 910 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 PI4K2AQ9BTU6 479 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 PLA2G2FQ9BZM2 168 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 C8orf33Q9H7E9 229 aaPredicted RBP10.27□□□□□ -0.77
CHD7-208ENST00000528280 VRTNQ9H8Y1 702 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 ZNF334Q9HCZ1 680 aaPredicted RBP10.27□□□□□ -0.77
CHD7-208ENST00000528280 PKD1L2Q7Z442 2459 aa10.27□□□□□ -0.77
CHD7-208ENST00000528280 TRIM66O15016 1216 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 STX10O60499 249 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 SOAT2O75908 522 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 C4BPAP04003 597 aaKnown RBP10.26□□□□□ -0.77
CHD7-208ENST00000528280 PDGFRBP09619 1106 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 KRT13P13646 458 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 GJA1P17302 382 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 PFKLP17858 780 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 ATF6P18850 670 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 FCARP24071 287 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 CYP2F1P24903 491 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 ANXA13P27216 316 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 PSMC2P35998 433 aaKnown RBP10.26□□□□□ -0.77
CHD7-208ENST00000528280 AVPR1AP37288 418 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 VIPR2P41587 438 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 NLRP12P59046 1061 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 AMPD2Q01433 879 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 FCHO2Q0JRZ9 810 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 NCOA4Q13772 614 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 ANGPT1Q15389 498 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 ZNF667Q5HYK9 610 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 CEP135Q66GS9 1140 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 VITQ6UXI7 678 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 INTS8Q75QN2 995 aaKnown RBP10.26□□□□□ -0.77
CHD7-208ENST00000528280 MON1AQ86VX9 555 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 C1orf210Q8IVY1 113 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 ELOA2Q8IYF1 753 aaPredicted RBP10.26□□□□□ -0.77
CHD7-208ENST00000528280 TTC9BQ8N6N2 239 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 CCDC150Q8NCX0 1101 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 ST13P5Q8NFI4 369 aaPredicted RBP10.26□□□□□ -0.77
CHD7-208ENST00000528280 OR6B3Q8NGW1 331 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 MYCBPAPQ8TBZ2 947 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 ZNF516Q92618 1163 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 EXOC4Q96A65 974 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 TNIP3Q96KP6 325 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 TIGD1Q96MW7 591 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 GSDMAQ96QA5 445 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 PKMYT1Q99640 499 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 LPIN3Q9BQK8 851 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 SYT15Q9BQS2 421 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 IER2Q9BTL4 223 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 TMLHEQ9NVH6 421 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 TCHHQ07283 1943 aa10.26□□□□□ -0.77
CHD7-208ENST00000528280 USP24Q9UPU5 2620 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 MYBPHLA2RUH7 354 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 SLC38A8A6NNN8 435 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 A8MXQ7 604 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 NOL4O94818 638 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 F11P03951 625 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 HMGA1P17096 107 aaKnown RBP10.25□□□□□ -0.77
CHD7-208ENST00000528280 PTPN1P18031 435 aaKnown RBP10.25□□□□□ -0.77
CHD7-208ENST00000528280 ACAT1P24752 427 aaKnown RBP10.25□□□□□ -0.77
CHD7-208ENST00000528280 LMO2P25791 158 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 GTF2H1P32780 548 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 GRIK1P39086 918 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 PPP1R2P41236 205 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms