RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 SERGEFQ9UGK8 458 aa9.19□□□□□ -0.94
CTNND1-217ENST00000527599 hCG_1984214I3L0E3 225 aa9.18□□□□□ -0.94
CTNND1-217ENST00000527599 PPIFP30405 207 aaKnown RBP9.18□□□□□ -0.94
CTNND1-217ENST00000527599 AGFG1P52594 562 aaKnown RBP9.18□□□□□ -0.94
CTNND1-217ENST00000527599 TFF2Q03403 129 aa9.18□□□□□ -0.94
CTNND1-217ENST00000527599 PLEKHG6Q3KR16 790 aa9.18□□□□□ -0.94
CTNND1-217ENST00000527599 FAM153CQ494X1 144 aa9.18□□□□□ -0.94
CTNND1-217ENST00000527599 FNDC1Q4ZHG4 1894 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-217ENST00000527599 PLAC9Q5JTB6 97 aa9.18□□□□□ -0.94
CTNND1-217ENST00000527599 ODR4Q5SWX8 454 aa9.18□□□□□ -0.94
CTNND1-217ENST00000527599 ZNF280BQ86YH2 543 aa9.18□□□□□ -0.94
CTNND1-217ENST00000527599 ATG4AQ8WYN0 398 aa9.18□□□□□ -0.94
CTNND1-217ENST00000527599 TRIM54Q9BYV2 358 aa9.18□□□□□ -0.94
CTNND1-217ENST00000527599 NDRG4Q9ULP0 352 aaKnown RBP9.18□□□□□ -0.94
CTNND1-217ENST00000527599 MRPS17Q9Y2R5 130 aaKnown RBP9.18□□□□□ -0.94
CTNND1-217ENST00000527599 ZNF213O14771 459 aa9.17□□□□□ -0.94
CTNND1-217ENST00000527599 TUSC2O75896 110 aa9.17□□□□□ -0.94
CTNND1-217ENST00000527599 HNRNPCP07910 306 aaKnown RBP eCLIP9.17□□□□□ -0.94
CTNND1-217ENST00000527599 IL6RP08887 468 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-217ENST00000527599 TREML2Q5T2D2 321 aa9.17□□□□□ -0.94
CTNND1-217ENST00000527599 ZNF618Q5T7W0 954 aa9.17□□□□□ -0.94
CTNND1-217ENST00000527599 FCRLBQ6BAA4 426 aa9.17□□□□□ -0.94
CTNND1-217ENST00000527599 RGS7BPQ6MZT1 257 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-217ENST00000527599 RUNDC1Q96C34 613 aa9.17□□□□□ -0.94
CTNND1-217ENST00000527599 PIH1D1Q9NWS0 290 aaKnown RBP9.17□□□□□ -0.94
CTNND1-217ENST00000527599 DLL3Q9NYJ7 618 aa9.17□□□□□ -0.94
CTNND1-217ENST00000527599 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-217ENST00000527599 NOB1Q9ULX3 412 aaKnown RBP9.17□□□□□ -0.94
CTNND1-217ENST00000527599 TMX2Q9Y320 296 aa9.17□□□□□ -0.94
CTNND1-217ENST00000527599 SETD1BQ9UPS6 1966 aaKnown RBP9.17□□□□□ -0.94
CTNND1-217ENST00000527599 COL3A1P02461 1466 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-217ENST00000527599 ERC2O15083 957 aa9.16□□□□□ -0.94
CTNND1-217ENST00000527599 SLC16A3O15427 465 aaKnown RBP9.16□□□□□ -0.94
CTNND1-217ENST00000527599 NXPH3O95157 252 aa9.16□□□□□ -0.94
CTNND1-217ENST00000527599 ZIK1Q3SY52 487 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-217ENST00000527599 NPNTQ6UXI9 565 aa9.16□□□□□ -0.94
CTNND1-217ENST00000527599 HASPINQ8TF76 798 aa9.16□□□□□ -0.94
CTNND1-217ENST00000527599 MESP1Q9BRJ9 268 aa9.16□□□□□ -0.94
CTNND1-217ENST00000527599 CNNM1Q9NRU3 951 aa9.16□□□□□ -0.94
CTNND1-217ENST00000527599 PADI4Q9UM07 663 aa9.16□□□□□ -0.94
CTNND1-217ENST00000527599 H0YIZ8 118 aa9.15□□□□□ -0.94
CTNND1-217ENST00000527599 THP07101 528 aa9.15□□□□□ -0.94
CTNND1-217ENST00000527599 CSF1RP07333 972 aa9.15□□□□□ -0.94
CTNND1-217ENST00000527599 KITP10721 976 aa9.15□□□□□ -0.94
CTNND1-217ENST00000527599 SWSAP1Q6NVH7 229 aa9.15□□□□□ -0.94
CTNND1-217ENST00000527599 DNAJC5GQ8N7S2 189 aa9.15□□□□□ -0.94
CTNND1-217ENST00000527599 KBTBD7Q8WVZ9 684 aa9.15□□□□□ -0.94
CTNND1-217ENST00000527599 DDB2Q92466 427 aa9.15□□□□□ -0.94
CTNND1-217ENST00000527599 REPS1Q96D71 796 aa9.15□□□□□ -0.94
CTNND1-217ENST00000527599 B3GNT5Q9BYG0 378 aa9.15□□□□□ -0.94
CTNND1-217ENST00000527599 DPH1Q9BZG8 443 aa9.15□□□□□ -0.94
CTNND1-217ENST00000527599 A0A087WWL8 130 aa9.14□□□□□ -0.95
CTNND1-217ENST00000527599 TLR5O60602 858 aa9.14□□□□□ -0.95
CTNND1-217ENST00000527599 FAM163BP0C2L3 166 aa9.14□□□□□ -0.95
CTNND1-217ENST00000527599 MYO1EQ12965 1108 aa9.14□□□□□ -0.95
CTNND1-217ENST00000527599 CTBP1Q13363 440 aa9.14□□□□□ -0.95
CTNND1-217ENST00000527599 ANO6Q4KMQ2 910 aa9.14□□□□□ -0.95
CTNND1-217ENST00000527599 TEDDM1Q5T9Z0 273 aa9.14□□□□□ -0.95
CTNND1-217ENST00000527599 SLC15A4Q8N697 577 aa9.14□□□□□ -0.95
CTNND1-217ENST00000527599 ANKS1AQ92625 1134 aa9.14□□□□□ -0.95
CTNND1-217ENST00000527599 GLG1Q92896 1179 aa9.14□□□□□ -0.95
CTNND1-217ENST00000527599 MOGAT1Q96PD6 335 aa9.14□□□□□ -0.95
CTNND1-217ENST00000527599 CXorf36Q9H7Y0 433 aa9.14□□□□□ -0.95
CTNND1-217ENST00000527599 TARM1B6A8C7 271 aa9.13□□□□□ -0.95
CTNND1-217ENST00000527599 FESP07332 822 aa9.13□□□□□ -0.95
CTNND1-217ENST00000527599 NHLRC4P0CG21 123 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-217ENST00000527599 NDUFB7P17568 137 aa9.13□□□□□ -0.95
CTNND1-217ENST00000527599 ATXN1P54253 815 aaKnown RBP9.13□□□□□ -0.95
CTNND1-217ENST00000527599 NFE2Q16621 373 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-217ENST00000527599 SMURF2Q9HAU4 748 aa9.13□□□□□ -0.95
CTNND1-217ENST00000527599 SHOC2Q9UQ13 582 aa9.13□□□□□ -0.95
CTNND1-217ENST00000527599 TMEM233B4DJY2 109 aa9.12□□□□□ -0.95
CTNND1-217ENST00000527599 BTN3A1O00481 513 aa9.12□□□□□ -0.95
CTNND1-217ENST00000527599 CTNND1O60716 968 aaKnown RBP9.12□□□□□ -0.95
CTNND1-217ENST00000527599 SCGB1D2O95969 90 aa9.12□□□□□ -0.95
CTNND1-217ENST00000527599 CYP2C18P33260 490 aa9.12□□□□□ -0.95
CTNND1-217ENST00000527599 ALDH9A1P49189 494 aa9.12□□□□□ -0.95
CTNND1-217ENST00000527599 SRSF4Q08170 494 aaKnown RBP9.12□□□□□ -0.95
CTNND1-217ENST00000527599 E2F2Q14209 437 aa9.12□□□□□ -0.95
CTNND1-217ENST00000527599 PTF1AQ7RTS3 328 aa9.12□□□□□ -0.95
CTNND1-217ENST00000527599 IL31RAQ8NI17 732 aa9.12□□□□□ -0.95
CTNND1-217ENST00000527599 A0A1W2PPL8 197 aa9.11□□□□□ -0.95
CTNND1-217ENST00000527599 A1L4Q6 167 aa9.11□□□□□ -0.95
CTNND1-217ENST00000527599 PRKCGP05129 697 aa9.11□□□□□ -0.95
CTNND1-217ENST00000527599 WNT3P56703 355 aa9.11□□□□□ -0.95
CTNND1-217ENST00000527599 GPSM2P81274 684 aa9.11□□□□□ -0.95
CTNND1-217ENST00000527599 FAM102BQ5T8I3 360 aa9.11□□□□□ -0.95
CTNND1-217ENST00000527599 CXorf57Q6NSI4 855 aaKnown RBP9.11□□□□□ -0.95
CTNND1-217ENST00000527599 ANKRD16Q6P6B7 361 aa9.11□□□□□ -0.95
CTNND1-217ENST00000527599 ZNF782Q6ZMW2 699 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-217ENST00000527599 R3HDM4Q96D70 268 aa9.11□□□□□ -0.95
CTNND1-217ENST00000527599 DUSP22Q9NRW4 184 aa9.11□□□□□ -0.95
CTNND1-217ENST00000527599 SH2B3Q9UQQ2 575 aa9.11□□□□□ -0.95
CTNND1-217ENST00000527599 SHROOM4Q9ULL8 1493 aa9.1□□□□□ -0.95
CTNND1-217ENST00000527599 A6NNZ2 444 aa9.1□□□□□ -0.95
CTNND1-217ENST00000527599 KRTAP1-1Q07627 177 aa9.1□□□□□ -0.95
CTNND1-217ENST00000527599 TMEM119Q4V9L6 283 aa9.1□□□□□ -0.95
CTNND1-217ENST00000527599 AARS2Q5JTZ9 985 aaKnown RBP9.1□□□□□ -0.95
CTNND1-217ENST00000527599 GAS2L3Q86XJ1 694 aa9.1□□□□□ -0.95
CTNND1-217ENST00000527599 CHPFQ8IZ52 775 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms