RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 P4HA1P13674 534 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 VCLP18206 1134 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 CES1P23141 567 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 STX2P32856 288 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 IGHMBP2P38935 993 aaKnown RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 C21orf59P57076 290 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 DLG4P78352 724 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 IFI35P80217 286 aaPredicted RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 TFAP4Q01664 338 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 CREB5Q02930 508 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 SF3A3Q12874 501 aaKnown RBP eCLIP6.09□□□□□ -1.43
CD44-225ENST00000527326 PPP2R5BQ15173 497 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 PCSK7Q16549 785 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 MMEL1Q495T6 779 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 AKAP4Q5JQC9 854 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 CGB2Q6NT52 195 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 ZNF449Q6P9G9 518 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 RFWD3Q6PCD5 774 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 DCLRE1AQ6PJP8 1040 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 CCBE1Q6UXH8 406 aaPredicted RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 TPTE2Q6XPS3 522 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 DGLUCYQ7Z3D6 616 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 PEX26Q7Z412 305 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 FBXO33Q7Z6M2 555 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 VPS37DQ86XT2 251 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 NME9Q86XW9 330 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 NOSTRINQ8IVI9 506 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 CADM3Q8N126 398 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 VPS52Q8N1B4 723 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.09□□□□□ -1.43
CD44-225ENST00000527326 TRIML2Q8N7C3 387 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 TTLL11Q8NHH1 800 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 ZFP28Q8NHY6 868 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 ANKRD49Q8WVL7 239 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 MS4A14Q96JA4 679 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 LRGUKQ96M69 825 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 SERPINB12Q96P63 405 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 FERMT1Q9BQL6 677 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 SPZ1Q9BXG8 430 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 CADM1Q9BY67 442 aaKnown RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 MRPL1Q9BYD6 325 aaKnown RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 CCSER1Q9C0I3 900 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 SENP6Q9GZR1 1112 aaPredicted RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 SEMA4AQ9H3S1 761 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 C17orf75Q9HAS0 396 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 RIC8AQ9NPQ8 531 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 MRGBPQ9NV56 204 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 DCAF16Q9NXF7 216 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 MOCS1Q9NZB8 636 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 DBF4Q9UBU7 674 aaPredicted RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 DNAJC12Q9UKB3 198 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 NOC2LQ9Y3T9 749 aaKnown RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 ACTL7BQ9Y614 415 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 TAF6LQ9Y6J9 622 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 PIK3C2AO00443 1686 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 ARHGAP23Q9P227 1491 aa6.09□□□□□ -1.44
CD44-225ENST00000527326 XIRP1Q702N8 1843 aaKnown RBP6.09□□□□□ -1.44
CD44-225ENST00000527326 PARP4Q9UKK3 1724 aaKnown RBP6.08□□□□□ -1.44
CD44-225ENST00000527326 WDR19Q8NEZ3 1342 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 TMEM131LA2VDJ0 1609 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 ALKQ9UM73 1620 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 MYH1P12882 1939 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 MYH2Q9UKX2 1941 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 A0A1W2PQ67 120 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 TLDC2A0PJX2 215 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 TMEM120BA0PK00 339 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 BTNL10A8MVZ5 291 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 F6X3S4 739 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 RBAK-RBAKDNI3L0D1 243 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 M0R082 166 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 ZNF263O14978 683 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 XPO1O14980 1071 aaKnown RBP6.08□□□□□ -1.44
CD44-225ENST00000527326 FYB1O15117 783 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 DAPK3O43293 454 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 XPOTO43592 962 aaKnown RBP6.08□□□□□ -1.44
CD44-225ENST00000527326 BUD23O43709 281 aaKnown RBP6.08□□□□□ -1.44
CD44-225ENST00000527326 ITM2AO43736 263 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 PDE8AO60658 829 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 ZNF254O75437 659 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 SULT1C4O75897 302 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 STAMBPO95630 424 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 CYP21A2P08686 494 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 SPATA31C1P0DKV0 1188 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 CDH2P19022 906 aaPredicted RBP6.08□□□□□ -1.44
CD44-225ENST00000527326 POLR2CP19387 275 aaPredicted RBP6.08□□□□□ -1.44
CD44-225ENST00000527326 TCEA1P23193 301 aaKnown RBP6.08□□□□□ -1.44
CD44-225ENST00000527326 MAPK1P28482 360 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 CHKAP35790 457 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 ETFBP38117 255 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 ADH7P40394 386 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 HSPA13P48723 471 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 ENTPD1P49961 510 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 IST1P53990 364 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 DRG2P55039 364 aaKnown RBP6.08□□□□□ -1.44
CD44-225ENST00000527326 VCPP55072 806 aaKnown RBP6.08□□□□□ -1.44
CD44-225ENST00000527326 GNG2P59768 71 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 CYP27A1Q02318 531 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 FKBP4Q02790 459 aaKnown RBP eCLIP6.08□□□□□ -1.44
CD44-225ENST00000527326 PPARDQ03181 441 aa6.08□□□□□ -1.44
CD44-225ENST00000527326 C19orf57Q0VDD7 668 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms