RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 SMARCE1Q969G3 411 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 FUBP3Q96I24 572 aaKnown RBP eCLIP18.17■□□□□ 0.5
CCS-203ENST00000526058 DPEP3Q9H4B8 488 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 SMYD3Q9H7B4 428 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 MAGEC2Q9UBF1 373 aaPredicted RBP18.17■□□□□ 0.5
CCS-203ENST00000526058 MAGED2Q9UNF1 606 aaPredicted RBP18.17■□□□□ 0.5
CCS-203ENST00000526058 ZNF638Q14966 1978 aaKnown RBP18.17■□□□□ 0.5
CCS-203ENST00000526058 TICRRQ7Z2Z1 1910 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 HEPACAM2A8MVW5 462 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 F11P03951 625 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 PSMC3P17980 439 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 RFX1P22670 979 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 BDNFP23560 247 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 CDC25CP30307 473 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 PSMC2P35998 433 aaKnown RBP18.16■□□□□ 0.5
CCS-203ENST00000526058 NLRP12P59046 1061 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 STARD6P59095 220 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 RPL10AP62906 217 aaKnown RBP18.16■□□□□ 0.5
CCS-203ENST00000526058 PFKPQ01813 784 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 CYP27A1Q02318 531 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 NHLH1Q02575 133 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 MLF2Q15773 248 aaPredicted RBP18.16■□□□□ 0.5
CCS-203ENST00000526058 ARHGAP15Q53QZ3 475 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 ZNF667Q5HYK9 610 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 MDH1BQ5I0G3 518 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 ISM2Q6H9L7 571 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 PHLDB3Q6NSJ2 640 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 SCARA5Q6ZMJ2 495 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 INTS8Q75QN2 995 aaKnown RBP18.16■□□□□ 0.5
CCS-203ENST00000526058 MYCBPAPQ8TBZ2 947 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 PCED1BQ96HM7 432 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 PRRX2Q99811 253 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 TRMT61BQ9BVS5 477 aaKnown RBP18.16■□□□□ 0.5
CCS-203ENST00000526058 FOXQ1Q9C009 403 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 SDCBP2Q9H190 292 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 BRD9Q9H8M2 597 aa18.16■□□□□ 0.5
CCS-203ENST00000526058 PIEZO1Q92508 2521 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 SLC38A8A6NNN8 435 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 A8MXQ7 604 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 GALR2O43603 387 aaPredicted RBP18.15■□□□□ 0.5
CCS-203ENST00000526058 HLA-DRAP01903 254 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 CSH1P0DML2 217 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 CSH2P0DML3 217 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 PTPN1P18031 435 aaKnown RBP18.15■□□□□ 0.5
CCS-203ENST00000526058 GDI1P31150 447 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 MAGEA11P43364 429 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 GCLMP48507 274 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 PPP3CAQ08209 521 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 MAPRE1Q15691 268 aaKnown RBP18.15■□□□□ 0.5
CCS-203ENST00000526058 SGSM1Q2NKQ1 1148 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 EDRF1Q3B7T1 1238 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 COBLL1Q53SF7 1204 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 SPOPLQ6IQ16 392 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 MFSD6LQ8IWD5 586 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 LRRC3BQ96PB8 259 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 GCNAQ96QF7 691 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 SLC46A2Q9BY10 475 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 TASP1Q9H6P5 420 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.15■□□□□ 0.51e-10■■■■■ 74.5
CCS-203ENST00000526058 HEBP1Q9NRV9 189 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 HOOK1Q9UJC3 728 aaKnown RBP18.15■□□□□ 0.5
CCS-203ENST00000526058 F5P12259 2224 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 COL4A2P08572 1712 aa18.15■□□□□ 0.5
CCS-203ENST00000526058 MIA3Q5JRA6 1907 aa18.14■□□□□ 0.49
CCS-203ENST00000526058 ANAPC1Q9H1A4 1944 aa18.14■□□□□ 0.49
CCS-203ENST00000526058 KINO60870 393 aaKnown RBP18.14■□□□□ 0.49
CCS-203ENST00000526058 NOL4O94818 638 aa18.14■□□□□ 0.49
CCS-203ENST00000526058 KRT13P13646 458 aa18.14■□□□□ 0.49
CCS-203ENST00000526058 CD72P21854 359 aa18.14■□□□□ 0.49
CCS-203ENST00000526058 GRIK1P39086 918 aa18.14■□□□□ 0.49
CCS-203ENST00000526058 PIK3CAP42336 1068 aa18.14■□□□□ 0.49
CCS-203ENST00000526058 NUBP1P53384 320 aa18.14■□□□□ 0.49
CCS-203ENST00000526058 PMS1P54277 932 aaKnown RBP18.14■□□□□ 0.49
CCS-203ENST00000526058 PTPN5P54829 565 aa18.14■□□□□ 0.49
CCS-203ENST00000526058 ELOA2Q8IYF1 753 aaPredicted RBP18.14■□□□□ 0.49
CCS-203ENST00000526058 ADSSL1Q8N142 457 aa18.14■□□□□ 0.49
CCS-203ENST00000526058 DEPDC1BQ8WUY9 529 aa18.14■□□□□ 0.49
CCS-203ENST00000526058 SHDQ96IW2 340 aa18.14■□□□□ 0.49
CCS-203ENST00000526058 DDX23Q9BUQ8 820 aaKnown RBP18.14■□□□□ 0.49
CCS-203ENST00000526058 SMG9Q9H0W8 520 aaKnown RBP18.14■□□□□ 0.49
CCS-203ENST00000526058 MMRN2Q9H8L6 949 aa18.14■□□□□ 0.49
CCS-203ENST00000526058 CHMP5Q9NZZ3 219 aa18.14■□□□□ 0.49
CCS-203ENST00000526058 TRIM49BA6NDI0 452 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 H0Y858 1186 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 CETN3O15182 167 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 LRRN2O75325 713 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 TADA3O75528 432 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 PRAMEF12O95522 483 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 ASS1P00966 412 aaKnown RBP18.13■□□□□ 0.49
CCS-203ENST00000526058 DCNP07585 359 aaKnown RBP18.13■□□□□ 0.49
CCS-203ENST00000526058 MCCD1P59942 119 aaPredicted RBP18.13■□□□□ 0.49
CCS-203ENST00000526058 PRKCQQ04759 706 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 TXNDC8Q6A555 127 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 ANKRD40Q6AI12 368 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 VSTM1Q6UX27 236 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 TPRG1Q6ZUI0 275 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 CCDC105Q8IYK2 499 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 MAB21L3Q8N8X9 362 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 B3GALNT2Q8NCR0 500 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 TAS1R2Q8TE23 839 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms