RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 FSTL1Q12841 308 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 DDX10Q13206 875 aaKnown RBP5.36□□□□□ -1.55
CSDE1-211ENST00000525970 PRKG1Q13976 671 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 FAM47AQ5JRC9 791 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 MFSD14BQ5SR56 506 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 ANKS6Q68DC2 871 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 LIN54Q6MZP7 749 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 DPY19L2P1Q6NXN4 242 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 UNC13DQ70J99 1090 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 HTR3DQ70Z44 454 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 DOK3Q7L591 496 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 ATG16L2Q8NAA4 619 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 NAXEQ8NCW5 288 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 OR56A3Q8NH54 315 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 FAM71BQ8TC56 605 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 MUL1Q969V5 352 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 LENG9Q96B70 501 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 EID2BQ96D98 161 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 SORBS1Q9BX66 1292 aaKnown RBP5.36□□□□□ -1.55
CSDE1-211ENST00000525970 CPEB1Q9BZB8 566 aaKnown RBP5.36□□□□□ -1.55
CSDE1-211ENST00000525970 CHST8Q9H2A9 424 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 ZHX3Q9H4I2 956 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 NRDE2Q9H7Z3 1164 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 NECTIN3Q9NQS3 549 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-211ENST00000525970 MOCS1Q9NZB8 636 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 POGKQ9P215 609 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 IGSF9Q9P2J2 1179 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 CLCA2Q9UQC9 943 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 RPS6KL1Q9Y6S9 549 aa5.36□□□□□ -1.55
CSDE1-211ENST00000525970 TBKBP1A7MCY6 615 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 PYCARD-AS1I3L0S3 204 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 EPB41L2O43491 1005 aaKnown RBP5.35□□□□□ -1.55
CSDE1-211ENST00000525970 KCNQ3O43525 872 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 PYGLP06737 847 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 MYL4P12829 197 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 KLRC1P26715 233 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 CASP2P42575 452 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 HABP2Q14520 560 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-211ENST00000525970 RAB30Q15771 203 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 DCAF17Q5H9S7 520 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-211ENST00000525970 HYIQ5T013 277 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 AFMIDQ63HM1 303 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 MRGPREQ86SM8 312 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 GALNT15Q8N3T1 639 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 GLIS1Q8NBF1 620 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 TFAP2CQ92754 450 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 USP13Q92995 863 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-211ENST00000525970 TRIM63Q969Q1 353 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 MYOCQ99972 504 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 NDC1Q9BTX1 674 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 GPR35Q9HC97 309 aa5.35□□□□□ -1.55
CSDE1-211ENST00000525970 A1CFQ9NQ94 594 aaKnown RBP5.35□□□□□ -1.55
CSDE1-211ENST00000525970 RUVBL1Q9Y265 456 aaKnown RBP5.35□□□□□ -1.55
CSDE1-211ENST00000525970 AQP12BA6NM10 295 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 IPO5O00410 1097 aaKnown RBP5.34□□□□□ -1.55
CSDE1-211ENST00000525970 NDST3O95803 873 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 A1BGP04217 495 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 RAP2AP10114 183 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 TXNP10599 105 aaKnown RBP5.34□□□□□ -1.55
CSDE1-211ENST00000525970 MTHFD1P11586 935 aaKnown RBP5.34□□□□□ -1.55
CSDE1-211ENST00000525970 TNFAIP3P21580 790 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 RXRGP48443 463 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 CARSP49589 748 aaKnown RBP5.34□□□□□ -1.55
CSDE1-211ENST00000525970 RAB32Q13637 225 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 METTL24Q5JXM2 366 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 C1QL3Q5VWW1 255 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 EFCAB12Q6NXP0 572 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 RNF44Q7L0R7 432 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 KRT28Q7Z3Y7 464 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 PDSS2Q86YH6 399 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 SDR16C5Q8N3Y7 309 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 OR52N2Q8NGI0 321 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 ZFP28Q8NHY6 868 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 SLC35B2Q8TB61 432 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 SLC25A43Q8WUT9 341 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-211ENST00000525970 LTV1Q96GA3 475 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-211ENST00000525970 RGL1Q9NZL6 768 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 FAM30AQ9NZY2 134 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 JKAMPQ9P055 326 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 LRFN1Q9P244 771 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 EIF2B4Q9UI10 523 aaKnown RBP5.34□□□□□ -1.55
CSDE1-211ENST00000525970 SORCS3Q9UPU3 1222 aa5.34□□□□□ -1.55
CSDE1-211ENST00000525970 SETD1BQ9UPS6 1966 aaKnown RBP5.34□□□□□ -1.55
CSDE1-211ENST00000525970 RRN3P2A6NIE6 340 aa5.33□□□□□ -1.56
CSDE1-211ENST00000525970 TMEM233B4DJY2 109 aa5.33□□□□□ -1.56
CSDE1-211ENST00000525970 EIF3FO00303 357 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-211ENST00000525970 PODXLO00592 558 aa5.33□□□□□ -1.56
CSDE1-211ENST00000525970 TRIM38O00635 465 aa5.33□□□□□ -1.56
CSDE1-211ENST00000525970 FAM20BO75063 409 aa5.33□□□□□ -1.56
CSDE1-211ENST00000525970 RPS6KA4O75676 772 aa5.33□□□□□ -1.56
CSDE1-211ENST00000525970 RECQL4O94761 1208 aa5.33□□□□□ -1.56
CSDE1-211ENST00000525970 GCP02774 474 aa5.33□□□□□ -1.56
CSDE1-211ENST00000525970 GJB1P08034 283 aa5.33□□□□□ -1.56
CSDE1-211ENST00000525970 RARBP10826 455 aa5.33□□□□□ -1.56
CSDE1-211ENST00000525970 FBLP22087 321 aaKnown RBP5.33□□□□□ -1.56
CSDE1-211ENST00000525970 MGAT1P26572 445 aa5.33□□□□□ -1.56
CSDE1-211ENST00000525970 ADRA1BP35368 520 aa5.33□□□□□ -1.56
CSDE1-211ENST00000525970 PHKA1P46020 1223 aa5.33□□□□□ -1.56
CSDE1-211ENST00000525970 KCNJ5P48544 419 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms