RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 RP9Q8TA86 221 aaKnown RBP5.3□□□□□ -1.56
CSDE1-210ENST00000525878 FAM167AQ96KS9 214 aa5.3□□□□□ -1.56
CSDE1-210ENST00000525878 MACROD1Q9BQ69 325 aa5.3□□□□□ -1.56
CSDE1-210ENST00000525878 PTDSS2Q9BVG9 487 aa5.3□□□□□ -1.56
CSDE1-210ENST00000525878 ELOVL5Q9NYP7 299 aa5.3□□□□□ -1.56
CSDE1-210ENST00000525878 SERTAD3Q9UJW9 196 aa5.3□□□□□ -1.56
CSDE1-210ENST00000525878 ADAMTS5Q9UNA0 930 aa5.3□□□□□ -1.56
CSDE1-210ENST00000525878 ATXN1LP0C7T5 689 aaKnown RBP5.29□□□□□ -1.56
CSDE1-210ENST00000525878 ENGP17813 658 aa5.29□□□□□ -1.56
CSDE1-210ENST00000525878 NR4A2P43354 598 aa5.29□□□□□ -1.56
CSDE1-210ENST00000525878 MAP2K6P52564 334 aa5.29□□□□□ -1.56
CSDE1-210ENST00000525878 LAMB3Q13751 1172 aa5.29□□□□□ -1.56
CSDE1-210ENST00000525878 LONRF3Q496Y0 759 aa5.29□□□□□ -1.56
CSDE1-210ENST00000525878 AWAT2Q6E213 333 aa5.29□□□□□ -1.56
CSDE1-210ENST00000525878 USP45Q70EL2 814 aa5.29□□□□□ -1.56
CSDE1-210ENST00000525878 PARS2Q7L3T8 475 aaKnown RBP5.29□□□□□ -1.56
CSDE1-210ENST00000525878 TECPR1Q7Z6L1 1165 aa5.29□□□□□ -1.56
CSDE1-210ENST00000525878 ATG4AQ8WYN0 398 aa5.29□□□□□ -1.56
CSDE1-210ENST00000525878 ASB2Q96Q27 587 aa5.29□□□□□ -1.56
CSDE1-210ENST00000525878 THAP7Q9BT49 309 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-210ENST00000525878 SPRTNQ9H040 489 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-210ENST00000525878 VPS16Q9H269 839 aa5.29□□□□□ -1.56
CSDE1-210ENST00000525878 ANLNQ9NQW6 1124 aa5.29□□□□□ -1.56
CSDE1-210ENST00000525878 LMBRD1Q9NUN5 540 aa5.29□□□□□ -1.56
CSDE1-210ENST00000525878 TUBA8Q9NY65 449 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-210ENST00000525878 H7C1Q1 480 aa5.28□□□□□ -1.56
CSDE1-210ENST00000525878 BCAR3O75815 825 aa5.28□□□□□ -1.56
CSDE1-210ENST00000525878 FTLP02792 175 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-210ENST00000525878 FESP07332 822 aa5.28□□□□□ -1.56
CSDE1-210ENST00000525878 PXNP49023 591 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-210ENST00000525878 NAPRTQ6XQN6 538 aa5.28□□□□□ -1.56
CSDE1-210ENST00000525878 TRIM72Q6ZMU5 477 aa5.28□□□□□ -1.56
CSDE1-210ENST00000525878 ZNF517Q6ZMY9 492 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-210ENST00000525878 CYP2W1Q8TAV3 490 aa5.28□□□□□ -1.56
CSDE1-210ENST00000525878 RITA1Q96K30 269 aa5.28□□□□□ -1.56
CSDE1-210ENST00000525878 ZC3H10Q96K80 434 aaKnown RBP5.28□□□□□ -1.56
CSDE1-210ENST00000525878 C5orf34Q96MH7 638 aa5.28□□□□□ -1.56
CSDE1-210ENST00000525878 WACQ9BTA9 647 aa5.28□□□□□ -1.56
CSDE1-210ENST00000525878 TTYH3Q9C0H2 523 aa5.28□□□□□ -1.56
CSDE1-210ENST00000525878 GABRQQ9UN88 632 aa5.28□□□□□ -1.56
CSDE1-210ENST00000525878 SPEF1Q9Y4P9 236 aa5.28□□□□□ -1.56
CSDE1-210ENST00000525878 POU2F2P09086 479 aa5.27□□□□□ -1.57
CSDE1-210ENST00000525878 NPSP0C0P6 89 aa5.27□□□□□ -1.57
CSDE1-210ENST00000525878 NKX6-1P78426 367 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-210ENST00000525878 AMPD3Q01432 767 aa5.27□□□□□ -1.57
CSDE1-210ENST00000525878 EXOSC9Q06265 439 aaKnown RBP5.27□□□□□ -1.57
CSDE1-210ENST00000525878 IQCB1Q15051 598 aa5.27□□□□□ -1.57
CSDE1-210ENST00000525878 ARHGAP40Q5TG30 622 aa5.27□□□□□ -1.57
CSDE1-210ENST00000525878 CRELD2Q6UXH1 353 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-210ENST00000525878 Q6ZWC4 215 aa5.27□□□□□ -1.57
CSDE1-210ENST00000525878 LRRC71Q8N4P6 559 aa5.27□□□□□ -1.57
CSDE1-210ENST00000525878 PNLDC1Q8NA58 520 aaKnown RBP5.27□□□□□ -1.57
CSDE1-210ENST00000525878 PRPF38AQ8NAV1 312 aaKnown RBP5.27□□□□□ -1.57
CSDE1-210ENST00000525878 GLG1Q92896 1179 aa5.27□□□□□ -1.57
CSDE1-210ENST00000525878 CAMKK2Q96RR4 588 aa5.27□□□□□ -1.57
CSDE1-210ENST00000525878 PNPOQ9NVS9 261 aa5.27□□□□□ -1.57
CSDE1-210ENST00000525878 PCDHA1Q9Y5I3 950 aa5.27□□□□□ -1.57
CSDE1-210ENST00000525878 WASHC2CQ9Y4E1 1318 aa5.26□□□□□ -1.57
CSDE1-210ENST00000525878 A1L4Q6 167 aa5.26□□□□□ -1.57
CSDE1-210ENST00000525878 KCNU1A8MYU2 1149 aa5.26□□□□□ -1.57
CSDE1-210ENST00000525878 ALG1L2C9J202 215 aa5.26□□□□□ -1.57
CSDE1-210ENST00000525878 DTNBO60941 627 aa5.26□□□□□ -1.57
CSDE1-210ENST00000525878 HDCP19113 662 aa5.26□□□□□ -1.57
CSDE1-210ENST00000525878 MMP13P45452 471 aa5.26□□□□□ -1.57
CSDE1-210ENST00000525878 RECQLP46063 649 aaPredicted RBP5.26□□□□□ -1.57
CSDE1-210ENST00000525878 CCT4P50991 539 aaKnown RBP5.26□□□□□ -1.57
CSDE1-210ENST00000525878 LILRA4P59901 499 aa5.26□□□□□ -1.57
CSDE1-210ENST00000525878 TRIP6Q15654 476 aaKnown RBP5.26□□□□□ -1.57
CSDE1-210ENST00000525878 KIRREL2Q6UWL6 708 aa5.26□□□□□ -1.57
CSDE1-210ENST00000525878 LAYNQ6UX15 382 aa5.26□□□□□ -1.57
CSDE1-210ENST00000525878 HMCESQ96FZ2 354 aa5.26□□□□□ -1.57
CSDE1-210ENST00000525878 KRTAP2-2Q9BYT5 123 aa5.26□□□□□ -1.57
CSDE1-210ENST00000525878 GLOD4Q9HC38 313 aa5.26□□□□□ -1.57
CSDE1-210ENST00000525878 PDGFCQ9NRA1 345 aa5.26□□□□□ -1.57
CSDE1-210ENST00000525878 NDRG4Q9ULP0 352 aaKnown RBP5.26□□□□□ -1.57
CSDE1-210ENST00000525878 E5RJQ4 531 aa5.25□□□□□ -1.57
CSDE1-210ENST00000525878 VIPR2P41587 438 aa5.25□□□□□ -1.57
CSDE1-210ENST00000525878 ARHGAP25P42331 645 aa5.25□□□□□ -1.57
CSDE1-210ENST00000525878 PDE1AP54750 535 aa5.25□□□□□ -1.57
CSDE1-210ENST00000525878 FHL1Q13642 323 aa5.25□□□□□ -1.57
CSDE1-210ENST00000525878 GTF2H3Q13889 308 aa5.25□□□□□ -1.57
CSDE1-210ENST00000525878 FAM50AQ14320 339 aaKnown RBP5.25□□□□□ -1.57
CSDE1-210ENST00000525878 FCRL6Q6DN72 434 aa5.25□□□□□ -1.57
CSDE1-210ENST00000525878 RGS7BPQ6MZT1 257 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-210ENST00000525878 MTHFD1LQ6UB35 978 aa5.25□□□□□ -1.57
CSDE1-210ENST00000525878 SOCS4Q8WXH5 440 aa5.25□□□□□ -1.57
CSDE1-210ENST00000525878 WASF1Q92558 559 aa5.25□□□□□ -1.57
CSDE1-210ENST00000525878 ASPSCR1Q9BZE9 553 aa5.25□□□□□ -1.57
CSDE1-210ENST00000525878 PLEKHM1Q9Y4G2 1056 aa5.25□□□□□ -1.57
CSDE1-210ENST00000525878 WDR17Q8IZU2 1322 aa5.24□□□□□ -1.57
CSDE1-210ENST00000525878 CACNA1IQ9P0X4 2223 aa5.24□□□□□ -1.57
CSDE1-210ENST00000525878 POC1B-GALNT4F8VUJ3 575 aa5.24□□□□□ -1.57
CSDE1-210ENST00000525878 UNC5CO95185 931 aa5.24□□□□□ -1.57
CSDE1-210ENST00000525878 CSF1RP07333 972 aa5.24□□□□□ -1.57
CSDE1-210ENST00000525878 SOX8P57073 446 aa5.24□□□□□ -1.57
CSDE1-210ENST00000525878 E2F2Q14209 437 aa5.24□□□□□ -1.57
CSDE1-210ENST00000525878 PLS1Q14651 629 aa5.24□□□□□ -1.57
CSDE1-210ENST00000525878 PGS1Q32NB8 556 aa5.24□□□□□ -1.57
CSDE1-210ENST00000525878 TBC1D25Q3MII6 688 aa5.24□□□□□ -1.57
CSDE1-210ENST00000525878 AMOTQ4VCS5 1084 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms