RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 CYP2F1P24903 491 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 CTHP32929 405 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 MLLT6P55198 1093 aaPredicted RBP10.12□□□□□ -0.79
SF3B2-204ENST00000525207 PSMC1P62191 440 aaKnown RBP10.12□□□□□ -0.79
SF3B2-204ENST00000525207 RPL10AP62906 217 aaKnown RBP10.12□□□□□ -0.79
SF3B2-204ENST00000525207 TAF12Q16514 161 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 KNOP1Q1ED39 458 aaKnown RBP10.12□□□□□ -0.79
SF3B2-204ENST00000525207 ZNF528Q3MIS6 628 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 ARHGAP29Q52LW3 1261 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 SDHAF4Q5VUM1 108 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 C1orf228Q6PIY5 440 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 TRAPPC11Q7Z392 1133 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 CMTM8Q8IZV2 173 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 RDH13Q8NBN7 331 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 GOLGA5Q8TBA6 731 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 BPIFB1Q8TDL5 484 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 CSGALNACT1Q8TDX6 532 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 FAM3CQ92520 227 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 TRMT2BQ96GJ1 504 aaKnown RBP10.12□□□□□ -0.79
SF3B2-204ENST00000525207 CHAMP1Q96JM3 812 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 SPATA32Q96LK8 384 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 LRRC3BQ96PB8 259 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 IER2Q9BTL4 223 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 UXTQ9UBK9 157 aaPredicted RBP10.12□□□□□ -0.79
SF3B2-204ENST00000525207 GTF3C4Q9UKN8 822 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 CDH9Q9ULB4 789 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 ZDHHC9Q9Y397 364 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 R3HCC1Q9Y3T6 440 aaKnown RBP10.12□□□□□ -0.79
SF3B2-204ENST00000525207 MYO16Q9Y6X6 1858 aa10.12□□□□□ -0.79
SF3B2-204ENST00000525207 FAM237AA0A1B0GTK4 181 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 A0A1B0GVL5 298 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 MYBPHLA2RUH7 354 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 STAU1O95793 577 aaKnown RBP10.11□□□□□ -0.79
SF3B2-204ENST00000525207 LMNAP02545 664 aaKnown RBP10.11□□□□□ -0.79
SF3B2-204ENST00000525207 MYL1P05976 194 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 WARSP23381 471 aaKnown RBP10.11□□□□□ -0.79
SF3B2-204ENST00000525207 CMA1P23946 247 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 CCNE1P24864 410 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 DDX6P26196 483 aaKnown RBP eCLIP10.11□□□□□ -0.79
SF3B2-204ENST00000525207 AVPR1AP37288 418 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 MAGEA11P43364 429 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 SOX9P48436 509 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 PLCB2Q00722 1185 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 STK4Q13043 487 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 MTAPQ13126 283 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 MAPRE1Q15691 268 aaKnown RBP10.11□□□□□ -0.79
SF3B2-204ENST00000525207 DDR2Q16832 855 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 KMT5BQ4FZB7 885 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 FAM171BQ6P995 826 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 C4orf50Q6ZRC1 276 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 SPATA2LQ8IUW3 424 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-204ENST00000525207 ADSSL1Q8N142 457 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 PLEKHO2Q8TD55 490 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 MRPS31Q92665 395 aaKnown RBP10.11□□□□□ -0.79
SF3B2-204ENST00000525207 MYLPFQ96A32 169 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 CCDC127Q96BQ5 260 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 PAGE5Q96GU1 130 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 ZFYVE19Q96K21 471 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 MYRFLQ96LU7 910 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 SLC46A2Q9BY10 475 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 SMG9Q9H0W8 520 aaKnown RBP10.11□□□□□ -0.79
SF3B2-204ENST00000525207 XYLT2Q9H1B5 865 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 C8orf33Q9H7E9 229 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-204ENST00000525207 KIF9Q9HAQ2 790 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 CRTAC1Q9NQ79 661 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 USP25Q9UHP3 1055 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 MAGED2Q9UNF1 606 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-204ENST00000525207 NME7Q9Y5B8 376 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 PCDHGA2Q9Y5H1 932 aa10.11□□□□□ -0.79
SF3B2-204ENST00000525207 SPTBN4Q9H254 2564 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 SOBPA7XYQ1 873 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 SPECC1L-ADORA2AF8WAN1 911 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 EXOC3O60645 756 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 KINO60870 393 aaKnown RBP10.1□□□□□ -0.79
SF3B2-204ENST00000525207 ATP2C2O75185 946 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 TACC1O75410 805 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 CHRNB1P11230 501 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 TDGF1P13385 188 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 LMO2P25791 158 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 CASP4P49662 377 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 TNNC1P63316 161 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 USP4Q13107 963 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 WDR44Q5JSH3 913 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 TDRD10Q5VZ19 366 aaKnown RBP10.1□□□□□ -0.79
SF3B2-204ENST00000525207 TXNDC11Q6PKC3 985 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 VSTM1Q6UX27 236 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 RALGPS2Q86X27 583 aaPredicted RBP10.1□□□□□ -0.79
SF3B2-204ENST00000525207 GPIHBP1Q8IV16 184 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 SLC9A9Q8IVB4 645 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 CELF5Q8N6W0 485 aaKnown RBP10.1□□□□□ -0.79
SF3B2-204ENST00000525207 MAB21L3Q8N8X9 362 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 ZBTB44Q8NCP5 570 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 RIN3Q8TB24 985 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 TMEM174Q8WUU8 243 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 ZNF516Q92618 1163 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 NELL1Q92832 810 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 USP13Q92995 863 aaPredicted RBP10.1□□□□□ -0.79
SF3B2-204ENST00000525207 PCED1BQ96HM7 432 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 MMS19Q96T76 1030 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 MRPL45Q9BRJ2 306 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms