RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 TOP6BLQ8N6T0 577 aa12.68□□□□□ -0.38
CLNS1A-202ENST00000525064 RDH13Q8NBN7 331 aa12.68□□□□□ -0.38
CLNS1A-202ENST00000525064 ZNF507Q8TCN5 953 aa12.68□□□□□ -0.38
CLNS1A-202ENST00000525064 SCFD1Q8WVM8 642 aa12.68□□□□□ -0.38
CLNS1A-202ENST00000525064 ATRIPQ8WXE1 791 aa12.68□□□□□ -0.38
CLNS1A-202ENST00000525064 USP13Q92995 863 aaPredicted RBP12.68□□□□□ -0.38
CLNS1A-202ENST00000525064 MSANTD3Q96H12 275 aa12.68□□□□□ -0.38
CLNS1A-202ENST00000525064 C7orf25Q9BPX7 421 aa12.68□□□□□ -0.38
CLNS1A-202ENST00000525064 GZF1Q9H116 711 aaPredicted RBP12.68□□□□□ -0.38
CLNS1A-202ENST00000525064 EPC1Q9H2F5 836 aa12.68□□□□□ -0.38
CLNS1A-202ENST00000525064 CUEDC2Q9H467 287 aa12.68□□□□□ -0.38
CLNS1A-202ENST00000525064 C8orf33Q9H7E9 229 aaPredicted RBP12.68□□□□□ -0.38
CLNS1A-202ENST00000525064 AGPAT3Q9NRZ7 376 aa12.68□□□□□ -0.38
CLNS1A-202ENST00000525064 KIAA0391O15091 583 aaKnown RBP12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 POLR2DO15514 142 aaKnown RBP12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 NOL4O94818 638 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 TNNC2P02585 160 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 CSH1P0DML2 217 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 CSH2P0DML3 217 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 ZSCAN22P10073 491 aaPredicted RBP12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 ARSAP15289 507 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 CYP2J2P51589 502 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 CCR3P51677 355 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 SRSF5Q13243 272 aaKnown RBP12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 CUL4BQ13620 913 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 LPAL2Q16609 132 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 NAIF1Q69YI7 327 aaPredicted RBP12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 PKN3Q6P5Z2 889 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 MAMSTRQ6ZN01 415 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 UNC13DQ70J99 1090 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 RALGPS2Q86X27 583 aaPredicted RBP12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 CELF5Q8N6W0 485 aaKnown RBP12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 IQUBQ8NA54 791 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 SPRYD3Q8NCJ5 442 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 HPDLQ96IR7 371 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 CHAMP1Q96JM3 812 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 SLC22A12Q96S37 553 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 SYT15Q9BQS2 421 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 IER2Q9BTL4 223 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 EBF3Q9H4W6 596 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 CRTAC1Q9NQ79 661 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 GKN1Q9NS71 199 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 NCDNQ9UBB6 729 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 PCDHA7Q9UN72 937 aa12.67□□□□□ -0.38
CLNS1A-202ENST00000525064 CACNA1AO00555 2505 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 CHURC1-FNTBB4DL54 471 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 K7ESF4 209 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 CST3P01034 146 aaPredicted RBP12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 DLATP10515 647 aaKnown RBP12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 AFMP43652 599 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 LHX1P48742 406 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 FNTBP49356 437 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 PLCB2Q00722 1185 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 CYP24A1Q07973 514 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 CCINQ13939 588 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 LRRC32Q14392 662 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 SNRNP35Q16560 246 aaKnown RBP12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 ITPRIPL2Q3MIP1 535 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 RESP18Q5W5W9 173 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 FAM171BQ6P995 826 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 STXBP4Q6ZWJ1 553 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 TRAPPC11Q7Z392 1133 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 SPATA2LQ8IUW3 424 aaPredicted RBP12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 WDR49Q8IV35 697 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 HSCBQ8IWL3 235 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 SCN4BQ8IWT1 228 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 SPEM1Q8N4L4 309 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 SPATA18Q8TC71 538 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 PLEKHO2Q8TD55 490 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 ZNF516Q92618 1163 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 MYLPFQ96A32 169 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 FAM83CQ9BQN1 747 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 MRPL45Q9BRJ2 306 aaKnown RBP12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 LRRC27Q9C0I9 530 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 ABCB6Q9NP58 842 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 SLC39A2Q9NP94 309 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 PARD6AQ9NPB6 346 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 SDK1Q7Z5N4 2213 aa12.66□□□□□ -0.38
CLNS1A-202ENST00000525064 UBE4BO95155 1302 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 C2orf78A6NCI8 922 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 KLRC4O43908 158 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 PDGFRBP09619 1106 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 WARSP23381 471 aaKnown RBP12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 BDNFP23560 247 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 DDX6P26196 483 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 PCSK1P29120 753 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 AVPR1AP37288 418 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 CXCL12P48061 93 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 CASP4P49662 377 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 USP46P62068 366 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 RPL10AP62906 217 aaKnown RBP12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 AMPD3Q01432 767 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 DNM1Q05193 864 aaKnown RBP12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 USP4Q13107 963 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 RUNX3Q13761 415 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 PSMD6Q15008 389 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 DUOXA2Q1HG44 320 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 CFAP221Q4G0U5 840 aa12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 HEATR6Q6AI08 1181 aaKnown RBP12.65□□□□□ -0.38
CLNS1A-202ENST00000525064 FSTL4Q6MZW2 842 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms