RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 C4orf50Q6ZRC1 276 aa19.85■□□□□ 0.77
CAPN1-203ENST00000525013 C1orf210Q8IVY1 113 aa19.85■□□□□ 0.77
CAPN1-203ENST00000525013 PLEKHO2Q8TD55 490 aa19.85■□□□□ 0.77
CAPN1-203ENST00000525013 CSGALNACT1Q8TDX6 532 aa19.85■□□□□ 0.77
CAPN1-203ENST00000525013 PARD3BQ8TEW8 1205 aa19.85■□□□□ 0.77
CAPN1-203ENST00000525013 MRPL45Q9BRJ2 306 aaKnown RBP19.85■□□□□ 0.77
CAPN1-203ENST00000525013 DMAC2Q9NW81 257 aa19.85■□□□□ 0.77
CAPN1-203ENST00000525013 SPATA6Q9NWH7 488 aaPredicted RBP19.85■□□□□ 0.77
CAPN1-203ENST00000525013 MAGEC2Q9UBF1 373 aaPredicted RBP19.85■□□□□ 0.77
CAPN1-203ENST00000525013 NDRG2Q9UN36 371 aaKnown RBP19.85■□□□□ 0.77
CAPN1-203ENST00000525013 PIAS3Q9Y6X2 628 aa19.85■□□□□ 0.77
CAPN1-203ENST00000525013 MAN2B1O00754 1011 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 NCAM2O15394 837 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 KIF20AO95235 890 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 PRAMEF12O95522 483 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 TARSP26639 723 aaKnown RBP19.84■□□□□ 0.77
CAPN1-203ENST00000525013 CYP27A1Q02318 531 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 MAPRE1Q15691 268 aaKnown RBP19.84■□□□□ 0.77
CAPN1-203ENST00000525013 CFAP221Q4G0U5 840 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 CEP135Q66GS9 1140 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 SLC9A9Q8IVB4 645 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 MAB21L3Q8N8X9 362 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 OR6B3Q8NGW1 331 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 MRPS31Q92665 395 aaKnown RBP19.84■□□□□ 0.77
CAPN1-203ENST00000525013 MYLPFQ96A32 169 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 SYAP1Q96A49 352 aaPredicted RBP19.84■□□□□ 0.77
CAPN1-203ENST00000525013 FUBP3Q96I24 572 aaKnown RBP eCLIP19.84■□□□□ 0.77
CAPN1-203ENST00000525013 LRRC3BQ96PB8 259 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 SLC46A2Q9BY10 475 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 SMG9Q9H0W8 520 aaKnown RBP19.84■□□□□ 0.77
CAPN1-203ENST00000525013 CRTAC1Q9NQ79 661 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 TRPV5Q9NQA5 729 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 MAPK8IP1Q9UQF2 711 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 PTPRDP23468 1912 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 GREB1Q4ZG55 1949 aa19.84■□□□□ 0.77
CAPN1-203ENST00000525013 GOLGA6L4A6NEF3 574 aa19.83■□□□□ 0.77
CAPN1-203ENST00000525013 SLC38A8A6NNN8 435 aa19.83■□□□□ 0.77
CAPN1-203ENST00000525013 LRRIQ3A6PVS8 624 aaPredicted RBP19.83■□□□□ 0.77
CAPN1-203ENST00000525013 CHADO15335 359 aa19.83■□□□□ 0.77
CAPN1-203ENST00000525013 CALUO43852 315 aaPredicted RBP19.83■□□□□ 0.77
CAPN1-203ENST00000525013 RHOBTB3O94955 611 aa19.83■□□□□ 0.77
CAPN1-203ENST00000525013 F11P03951 625 aa19.83■□□□□ 0.77
CAPN1-203ENST00000525013 ATICP31939 592 aa19.83■□□□□ 0.77
CAPN1-203ENST00000525013 AP3M2P53677 418 aa19.83■□□□□ 0.77
CAPN1-203ENST00000525013 NUCB2P80303 420 aa19.83■□□□□ 0.77
CAPN1-203ENST00000525013 FCHO2Q0JRZ9 810 aa19.83■□□□□ 0.77
CAPN1-203ENST00000525013 TDRD10Q5VZ19 366 aaKnown RBP19.83■□□□□ 0.77
CAPN1-203ENST00000525013 TMEM150AQ86TG1 271 aa19.83■□□□□ 0.77
CAPN1-203ENST00000525013 CMTM8Q8IZV2 173 aa19.83■□□□□ 0.77
CAPN1-203ENST00000525013 CCDC34Q96HJ3 373 aa19.83■□□□□ 0.77
CAPN1-203ENST00000525013 ZFYVE19Q96K21 471 aa19.83■□□□□ 0.77
CAPN1-203ENST00000525013 UXTQ9UBK9 157 aaPredicted RBP19.83■□□□□ 0.77
CAPN1-203ENST00000525013 ZMYM5Q9UJ78 669 aa19.83■□□□□ 0.77
CAPN1-203ENST00000525013 FRMD4BQ9Y2L6 1034 aa19.83■□□□□ 0.77
CAPN1-203ENST00000525013 KIF26AQ9ULI4 1882 aaPredicted RBP19.83■□□□□ 0.76
CAPN1-203ENST00000525013 COL4A2P08572 1712 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 USP34Q70CQ2 3546 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 PROB1E7EW31 1015 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 TACC1O75410 805 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 NOL4O94818 638 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 BDNFP23560 247 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 DDX6P26196 483 aaKnown RBP eCLIP19.82■□□□□ 0.76
CAPN1-203ENST00000525013 WEE1P30291 646 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 AVPR1AP37288 418 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 GRIK1P39086 918 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 MAGEA11P43364 429 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 KPNA1P52294 538 aaPredicted RBP19.82■□□□□ 0.76
CAPN1-203ENST00000525013 NCOA4Q13772 614 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 ZNF699Q32M78 642 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 ARHGAP29Q52LW3 1261 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 MDH1BQ5I0G3 518 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 TXNDC8Q6A555 127 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 CELF5Q8N6W0 485 aaKnown RBP19.82■□□□□ 0.76
CAPN1-203ENST00000525013 MYCBPAPQ8TBZ2 947 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 BPIFB1Q8TDL5 484 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 FAM3CQ92520 227 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 XYLT2Q9H1B5 865 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 OBP2AQ9NY56 170 aa19.82■□□□□ 0.76
CAPN1-203ENST00000525013 MYH10P35580 1976 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 ANAPC1Q9H1A4 1944 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 SHISA7A6NL88 538 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 ARNTLO00327 626 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 STAU1O95793 577 aaKnown RBP19.81■□□□□ 0.76
CAPN1-203ENST00000525013 FAM163BP0C2L3 166 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 MAGEA9P43362 315 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 DLG4P78352 724 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 CLDN10P78369 228 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 ZNF667Q5HYK9 610 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 VSTM1Q6UX27 236 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 TTC8Q8TAM2 541 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 TMEM174Q8WUU8 243 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 NKD2Q969F2 451 aaPredicted RBP19.81■□□□□ 0.76
CAPN1-203ENST00000525013 CLDN23Q96B33 292 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 TRMT2BQ96GJ1 504 aaKnown RBP19.81■□□□□ 0.76
CAPN1-203ENST00000525013 PCED1BQ96HM7 432 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 TRPC7Q9HCX4 862 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 THG1LQ9NWX6 298 aaKnown RBP19.81■□□□□ 0.76
CAPN1-203ENST00000525013 PATJQ8NI35 1801 aa19.81■□□□□ 0.76
CAPN1-203ENST00000525013 EP300Q09472 2414 aaPredicted RBP19.8■□□□□ 0.76
CAPN1-203ENST00000525013 A8MXQ7 604 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms