RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 ARID3BQ8IVW6 561 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 IRF7Q92985 503 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 MYLPFQ96A32 169 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 FUBP3Q96I24 572 aaKnown RBP eCLIP11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 XYLT2Q9H1B5 865 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 SNX25Q9H3E2 840 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 LTB4R2Q9NPC1 389 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 HEBP1Q9NRV9 189 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 TRAF3IP3Q9Y228 551 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 FANCMQ8IYD8 2048 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 CACNA1HO95180 2353 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 SHISA7A6NL88 538 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 C4BPAP04003 597 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 PDGFRBP09619 1106 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 GLULP15104 373 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 MAGEA11P43364 429 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 NLRP12P59046 1061 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 BIRC3Q13489 604 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 UBXN2BQ14CS0 331 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 ANGPT1Q15389 498 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 CFAP221Q4G0U5 840 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 C4orf50Q6ZRC1 276 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 TMEM150AQ86TG1 271 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 GPIHBP1Q8IV16 184 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 FMR1NBQ8N0W7 255 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 GUF1Q8N442 669 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 TMC2Q8TDI7 906 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 SYAP1Q96A49 352 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 OSBPL6Q9BZF3 934 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 TRPV5Q9NQA5 729 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 OBP2AQ9NY56 170 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 MAGEC2Q9UBF1 373 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 MTF2Q9Y483 593 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 ZNF263O14978 683 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 VNN1O95497 513 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 PRAMEF12O95522 483 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 GNL1P36915 607 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 DLG4P78352 724 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 WDR72Q3MJ13 1102 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 C1orf220Q5T0J3 134 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 CEP135Q66GS9 1140 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 SCN4BQ8IWT1 228 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 YAF2Q8IY57 180 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 OR6B3Q8NGW1 331 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 TRMT2BQ96GJ1 504 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 LRRC3BQ96PB8 259 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 SLC46A2Q9BY10 475 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 VRTNQ9H8Y1 702 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 MAGED2Q9UNF1 606 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 MAPK8IP1Q9UQF2 711 aa11.94□□□□□ -0.5
TRAPPC4-204ENST00000524797 MYH10P35580 1976 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 FAM170BA6NMN3 283 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 ARNTLO00327 626 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 DPYSL4O14531 572 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 MAPK13O15264 365 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 CD72P21854 359 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 DDX6P26196 483 aaKnown RBP eCLIP11.93□□□□□ -0.53e-7■□□□□ 9.5
TRAPPC4-204ENST00000524797 TARSP26639 723 aaKnown RBP11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 FCHO2Q0JRZ9 810 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 PNOCQ13519 176 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 NCOA4Q13772 614 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 MAPRE1Q15691 268 aaKnown RBP11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 ZNF699Q32M78 642 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 MDH1BQ5I0G3 518 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 ZNF852Q6ZMS4 543 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 ENGASEQ8NFI3 743 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 MYCBPAPQ8TBZ2 947 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 CCDC34Q96HJ3 373 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 NELL2Q99435 816 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 UXTQ9UBK9 157 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 NXF1Q9UBU9 619 aaKnown RBP11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 ZMYM5Q9UJ78 669 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 FRMD4BQ9Y2L6 1034 aa11.93□□□□□ -0.5
TRAPPC4-204ENST00000524797 GOLGA6L4A6NEF3 574 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 PROB1E7EW31 1015 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 CHADO15335 359 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 TADA3O75528 432 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 NBL1P41271 181 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 CYP27A1Q02318 531 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 ZACNQ401N2 412 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 ZNF667Q5HYK9 610 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 VSTM1Q6UX27 236 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 MRPS31Q92665 395 aaKnown RBP11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 MYRFLQ96LU7 910 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 SMG9Q9H0W8 520 aaKnown RBP11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 DPEP3Q9H4B8 488 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 SMYD3Q9H7B4 428 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 CACNA1IQ9P0X4 2223 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 SOBPA7XYQ1 873 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 MAN2B1O00754 1011 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 PTPN1P18031 435 aaKnown RBP11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 BDNFP23560 247 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 NR2F2P24468 414 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 MAGEA9P43362 315 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 RAP1GAPP47736 663 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 ZCWPW2Q504Y3 356 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 ARHGAP29Q52LW3 1261 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 TXNDC8Q6A555 127 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 MON1AQ86VX9 555 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 CMTM8Q8IZV2 173 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms