RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 SMARCB1Q12824 385 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 IQCB1Q15051 598 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 DDR2Q16832 855 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 PHLDB3Q6NSJ2 640 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 GBP6Q6ZN66 633 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 GET4Q7L5D6 327 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-224ENST00000523873 SCN4BQ8IWT1 228 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 PPM1KQ8N3J5 372 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 UBR7Q8N806 425 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 C12orf29Q8N999 325 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 ST13P5Q8NFI4 369 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-224ENST00000523873 FAM200AQ8TCP9 573 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 C2orf15Q8WU43 125 aaKnown RBP13.66□□□□□ -0.22
VEGFA-224ENST00000523873 BPIFA3Q9BQP9 254 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 CORO1BQ9BR76 489 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 PHF7Q9BWX1 381 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-224ENST00000523873 ZNF334Q9HCZ1 680 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-224ENST00000523873 WDR6Q9NNW5 1121 aaKnown RBP13.66□□□□□ -0.22
VEGFA-224ENST00000523873 AJAP1Q9UKB5 411 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-224ENST00000523873 MAFFQ9ULX9 164 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 FAM50BQ9Y247 325 aa13.66□□□□□ -0.22
VEGFA-224ENST00000523873 CALCAP01258 141 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 RHOP08100 348 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 MYL4P12829 197 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 ZNF18P17022 549 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 GJA1P17302 382 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 PON1P27169 355 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 ADORA2BP29275 332 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 TUFMP49411 452 aaKnown RBP13.65□□□□□ -0.22
VEGFA-224ENST00000523873 COPB1P53618 953 aaKnown RBP13.65□□□□□ -0.22
VEGFA-224ENST00000523873 RAD23BP54727 409 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 ZP2Q05996 745 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 KCNMA1Q12791 1236 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 MTMR3Q13615 1198 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 SLC5A9Q2M3M2 681 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 TRIM65Q6PJ69 517 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 C4orf50Q6ZRC1 276 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 PAQR9Q6ZVX9 377 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 FAM35AQ86V20 835 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 UNC93AQ86WB7 457 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 ITFG1Q8TB96 612 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 ING5Q8WYH8 240 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 TCEAL4Q96EI5 215 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 ZNF512Q96ME7 567 aaPredicted RBP13.65□□□□□ -0.22
VEGFA-224ENST00000523873 KREMEN1Q96MU8 473 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 NECTIN4Q96NY8 510 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 MED10Q9BTT4 135 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 NT5C1AQ9BXI3 368 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 CBX8Q9HC52 389 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 SIX2Q9NPC8 291 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 CD320Q9NPF0 282 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 TMEM30AQ9NV96 361 aa13.65□□□□□ -0.22
VEGFA-224ENST00000523873 HELZP42694 1942 aaKnown RBP13.64□□□□□ -0.23
VEGFA-224ENST00000523873 C2CD4DB7Z1M9 353 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 POU2F2P09086 479 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 PTPN2P17706 415 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 CDK11BP21127 795 aaKnown RBP13.64□□□□□ -0.23
VEGFA-224ENST00000523873 ACO1P21399 889 aaKnown RBP13.64□□□□□ -0.23
VEGFA-224ENST00000523873 FSHRP23945 695 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 GRIK1P39086 918 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 CCR2P41597 374 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 KLK7P49862 253 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 EPHB3P54753 998 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 PLD1Q13393 1074 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 MAPRE1Q15691 268 aaKnown RBP13.64□□□□□ -0.23
VEGFA-224ENST00000523873 EXOC3L4Q17RC7 722 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 CFAP221Q4G0U5 840 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 PABPC1LQ4VXU2 614 aaKnown RBP13.64□□□□□ -0.23
VEGFA-224ENST00000523873 POTEHQ6S545 545 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 CYP26C1Q6V0L0 522 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 RTL10Q7L3V2 364 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 DNAJB7Q7Z6W7 309 aaPredicted RBP13.64□□□□□ -0.23
VEGFA-224ENST00000523873 LUZP1Q86V48 1076 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 TMC8Q8IU68 726 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 ADHFE1Q8IWW8 467 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 FUKQ8N0W3 1084 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 CRYBG2Q8N1P7 616 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 ELMOD1Q8N336 334 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 SLC4A11Q8NBS3 891 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 SLC2A14Q8TDB8 520 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 TNIP3Q96KP6 325 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 MYADMQ96S97 322 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 LRRC3Q9BY71 257 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 ABCB6Q9NP58 842 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 UBE2TQ9NPD8 197 aaPredicted RBP13.64□□□□□ -0.23
VEGFA-224ENST00000523873 HSFX1Q9UBD0 423 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 LIMA1Q9UHB6 759 aaKnown RBP13.64□□□□□ -0.23
VEGFA-224ENST00000523873 PCDHB4Q9Y5E5 795 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 C5orf42Q9H799 3197 aa13.64□□□□□ -0.23
VEGFA-224ENST00000523873 GTPBP10A4D1E9 387 aaKnown RBP13.63□□□□□ -0.23
VEGFA-224ENST00000523873 SMTNL1A8MU46 457 aa13.63□□□□□ -0.23
VEGFA-224ENST00000523873 RNF225M0QZC1 329 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-224ENST00000523873 CEBPBP17676 345 aa13.63□□□□□ -0.23
VEGFA-224ENST00000523873 TBXAS1P24557 533 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-224ENST00000523873 GBP2P32456 591 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-224ENST00000523873 SSTR3P32745 418 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-224ENST00000523873 PTPN21Q16825 1174 aa13.63□□□□□ -0.23
VEGFA-224ENST00000523873 ARHGAP44Q17R89 818 aa13.63□□□□□ -0.23
VEGFA-224ENST00000523873 PRSS36Q5K4E3 855 aa13.63□□□□□ -0.23
VEGFA-224ENST00000523873 IQCEQ6IPM2 695 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms