RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 VPS45Q9NRW7 570 aa27.88■■■□□ 2.05
PVT1-219ENST00000523427 GTF3C4Q9UKN8 822 aa27.88■■■□□ 2.05
PVT1-219ENST00000523427 L1RE1Q9UN81 338 aa27.88■■■□□ 2.05
PVT1-219ENST00000523427 STYXL1Q9Y6J8 313 aa27.88■■■□□ 2.05
PVT1-219ENST00000523427 HUS1O60921 280 aa27.87■■■□□ 2.05
PVT1-219ENST00000523427 TADA3O75528 432 aa27.87■■■□□ 2.05
PVT1-219ENST00000523427 AKAP3O75969 853 aa27.87■■■□□ 2.05
PVT1-219ENST00000523427 IL18RAPO95256 599 aa27.87■■■□□ 2.05
PVT1-219ENST00000523427 KCNK5O95279 499 aa27.87■■■□□ 2.05
PVT1-219ENST00000523427 RPL10AP62906 217 aaKnown RBP27.87■■■□□ 2.05
PVT1-219ENST00000523427 KCNA1Q09470 495 aa27.87■■■□□ 2.05
PVT1-219ENST00000523427 DMC1Q14565 340 aa27.87■■■□□ 2.05
PVT1-219ENST00000523427 ELF2Q15723 593 aa27.87■■■□□ 2.05
PVT1-219ENST00000523427 SCARA3Q6AZY7 606 aa27.87■■■□□ 2.05
PVT1-219ENST00000523427 ZNF720Q7Z2F6 126 aa27.87■■■□□ 2.05
PVT1-219ENST00000523427 CD101Q93033 1021 aa27.87■■■□□ 2.05
PVT1-219ENST00000523427 EXOC4Q96A65 974 aa27.87■■■□□ 2.05
PVT1-219ENST00000523427 CACNA1GO43497 2377 aa27.87■■■□□ 2.05
PVT1-219ENST00000523427 HCRTO43612 131 aa27.86■■■□□ 2.05
PVT1-219ENST00000523427 APBB3O95704 486 aa27.86■■■□□ 2.05
PVT1-219ENST00000523427 DDIT3P35638 169 aa27.86■■■□□ 2.05
PVT1-219ENST00000523427 LONP1P36776 959 aaKnown RBP27.86■■■□□ 2.05
PVT1-219ENST00000523427 PNPLA4P41247 253 aa27.86■■■□□ 2.05
PVT1-219ENST00000523427 DGKEP52429 567 aa27.86■■■□□ 2.05
PVT1-219ENST00000523427 FAM160A1Q05DH4 1040 aa27.86■■■□□ 2.05
PVT1-219ENST00000523427 POSTNQ15063 836 aa27.86■■■□□ 2.05
PVT1-219ENST00000523427 FBXO43Q4G163 708 aa27.86■■■□□ 2.05
PVT1-219ENST00000523427 PSAPL1Q6NUJ1 521 aa27.86■■■□□ 2.05
PVT1-219ENST00000523427 EZH1Q92800 747 aaPredicted RBP27.86■■■□□ 2.05
PVT1-219ENST00000523427 LSM14BQ9BX40 385 aaKnown RBP27.86■■■□□ 2.05
PVT1-219ENST00000523427 MRPL44Q9H9J2 332 aaKnown RBP27.86■■■□□ 2.05
PVT1-219ENST00000523427 UXTQ9UBK9 157 aaPredicted RBP27.86■■■□□ 2.05
PVT1-219ENST00000523427 RALYQ9UKM9 306 aaKnown RBP27.86■■■□□ 2.05
PVT1-219ENST00000523427 CEP295Q9C0D2 2601 aa27.86■■■□□ 2.05
PVT1-219ENST00000523427 TRAV19A0A0A6YYK7 116 aa27.85■■■□□ 2.05
PVT1-219ENST00000523427 GOLGA8IPA6NC78 632 aa27.85■■■□□ 2.05
PVT1-219ENST00000523427 GOLGA8JA6NMD2 632 aa27.85■■■□□ 2.05
PVT1-219ENST00000523427 KRT19P08727 400 aa27.85■■■□□ 2.05
PVT1-219ENST00000523427 MYL7Q01449 175 aa27.85■■■□□ 2.05
PVT1-219ENST00000523427 ZNF268Q14587 947 aaPredicted RBP27.85■■■□□ 2.05
PVT1-219ENST00000523427 SF3A1Q15459 793 aaKnown RBP27.85■■■□□ 2.05
PVT1-219ENST00000523427 INTS6LQ5JSJ4 861 aaKnown RBP27.85■■■□□ 2.05
PVT1-219ENST00000523427 CSGALNACT2Q8N6G5 542 aa27.85■■■□□ 2.05
PVT1-219ENST00000523427 ARL14EPQ8N8R7 260 aaPredicted RBP27.85■■■□□ 2.05
PVT1-219ENST00000523427 OSCP1Q8WVF1 389 aa27.85■■■□□ 2.05
PVT1-219ENST00000523427 EDEM2Q9BV94 578 aa27.85■■■□□ 2.05
PVT1-219ENST00000523427 ST6GALNAC4Q9H4F1 302 aa27.85■■■□□ 2.05
PVT1-219ENST00000523427 CHD6Q8TD26 2715 aa27.84■■■□□ 2.05
PVT1-219ENST00000523427 RHOBTB1O94844 696 aa27.84■■■□□ 2.05
PVT1-219ENST00000523427 CAVIN2O95810 425 aa27.84■■■□□ 2.05
PVT1-219ENST00000523427 USP17L7P0C7H9 530 aa27.84■■■□□ 2.05
PVT1-219ENST00000523427 RABEP1Q15276 862 aa27.84■■■□□ 2.05
PVT1-219ENST00000523427 USP49Q70CQ1 688 aa27.84■■■□□ 2.05
PVT1-219ENST00000523427 SYT13Q7L8C5 426 aa27.84■■■□□ 2.05
PVT1-219ENST00000523427 OSTM1Q86WC4 334 aa27.84■■■□□ 2.05
PVT1-219ENST00000523427 SPATA2LQ8IUW3 424 aaPredicted RBP27.84■■■□□ 2.05
PVT1-219ENST00000523427 C1orf127Q8N9H9 656 aa27.84■■■□□ 2.05
PVT1-219ENST00000523427 EPSTI1Q96J88 318 aa27.84■■■□□ 2.05
PVT1-219ENST00000523427 ACBD6Q9BR61 282 aa27.84■■■□□ 2.05
PVT1-219ENST00000523427 SMC3Q9UQE7 1217 aa27.84■■■□□ 2.05
PVT1-219ENST00000523427 SNX9Q9Y5X1 595 aa27.84■■■□□ 2.05
PVT1-219ENST00000523427 C4orf47A7E2U8 309 aa27.83■■■□□ 2.05
PVT1-219ENST00000523427 NOL4O94818 638 aa27.83■■■□□ 2.05
PVT1-219ENST00000523427 SEC13P55735 322 aa27.83■■■□□ 2.05
PVT1-219ENST00000523427 ZNF77Q15935 545 aa27.83■■■□□ 2.05
PVT1-219ENST00000523427 LARP1BQ659C4 914 aaKnown RBP27.83■■■□□ 2.05
PVT1-219ENST00000523427 TTC30AQ86WT1 665 aa27.83■■■□□ 2.05
PVT1-219ENST00000523427 NT5DC4Q86YG4 428 aa27.83■■■□□ 2.05
PVT1-219ENST00000523427 SH3RF2Q8TEC5 729 aa27.83■■■□□ 2.05
PVT1-219ENST00000523427 ATP2A3Q93084 1043 aa27.83■■■□□ 2.05
PVT1-219ENST00000523427 ACDQ96AP0 544 aa27.83■■■□□ 2.05
PVT1-219ENST00000523427 TPSD1Q9BZJ3 242 aa27.83■■■□□ 2.05
PVT1-219ENST00000523427 LINC00597Q9H2U6 94 aa27.83■■■□□ 2.05
PVT1-219ENST00000523427 DENND4CQ5VZ89 1909 aa27.82■■■□□ 2.04
PVT1-219ENST00000523427 EML5Q05BV3 1969 aa27.82■■■□□ 2.04
PVT1-219ENST00000523427 C2orf78A6NCI8 922 aa27.82■■■□□ 2.04
PVT1-219ENST00000523427 SOBPA7XYQ1 873 aa27.82■■■□□ 2.04
PVT1-219ENST00000523427 GCNT3O95395 438 aa27.82■■■□□ 2.04
PVT1-219ENST00000523427 NOVA1P51513 510 aaKnown RBP27.82■■■□□ 2.04
PVT1-219ENST00000523427 POU5F1Q01860 360 aaKnown RBP27.82■■■□□ 2.04
PVT1-219ENST00000523427 EML3Q32P44 896 aa27.82■■■□□ 2.04
PVT1-219ENST00000523427 TSTD1Q8NFU3 115 aa27.82■■■□□ 2.04
PVT1-219ENST00000523427 CACTINQ8WUQ7 758 aaKnown RBP27.82■■■□□ 2.04
PVT1-219ENST00000523427 LEO1Q8WVC0 666 aaPredicted RBP27.82■■■□□ 2.04
PVT1-219ENST00000523427 RBAKQ9NYW8 714 aaPredicted RBP27.82■■■□□ 2.04
PVT1-219ENST00000523427 EXOC7Q9UPT5 735 aa27.82■■■□□ 2.04
PVT1-219ENST00000523427 CFAP47Q6ZTR5 3102 aa27.82■■■□□ 2.04
PVT1-219ENST00000523427 GIPC1O14908 333 aa27.81■■■□□ 2.04
PVT1-219ENST00000523427 CD2BP2O95400 341 aaKnown RBP27.81■■■□□ 2.04
PVT1-219ENST00000523427 BMP15O95972 392 aa27.81■■■□□ 2.04
PVT1-219ENST00000523427 NR1H3Q13133 447 aa27.81■■■□□ 2.04
PVT1-219ENST00000523427 KCNB1Q14721 858 aa27.81■■■□□ 2.04
PVT1-219ENST00000523427 C2orf27AQ580R0 203 aa27.81■■■□□ 2.04
PVT1-219ENST00000523427 BRSK2Q8IWQ3 736 aa27.81■■■□□ 2.04
PVT1-219ENST00000523427 ADGRF2Q8IZF7 708 aa27.81■■■□□ 2.04
PVT1-219ENST00000523427 SYCP3Q8IZU3 236 aa27.81■■■□□ 2.04
PVT1-219ENST00000523427 HVCN1Q96D96 273 aa27.81■■■□□ 2.04
PVT1-219ENST00000523427 TRMT2BQ96GJ1 504 aaKnown RBP27.81■■■□□ 2.04
PVT1-219ENST00000523427 ACCSQ96QU6 501 aa27.81■■■□□ 2.04
PVT1-219ENST00000523427 PCIF1Q9H4Z3 704 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms