RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 C18orf8Q96DM3 657 aa16.33■□□□□ 0.21
CTNNA1-236ENST00000522792 TNIP3Q96KP6 325 aa16.33■□□□□ 0.21
CTNNA1-236ENST00000522792 MCEEQ96PE7 176 aa16.33■□□□□ 0.21
CTNNA1-236ENST00000522792 ELAC1Q9H777 363 aaKnown RBP16.33■□□□□ 0.21
CTNNA1-236ENST00000522792 HESX1Q9UBX0 185 aa16.33■□□□□ 0.21
CTNNA1-236ENST00000522792 DNAJB4Q9UDY4 337 aa16.33■□□□□ 0.21
CTNNA1-236ENST00000522792 TCRBV5S1A1TA0A578 114 aa16.33■□□□□ 0.2
CTNNA1-236ENST00000522792 MYO1FO00160 1098 aa16.33■□□□□ 0.2
CTNNA1-236ENST00000522792 ODC1P11926 461 aa16.33■□□□□ 0.2
CTNNA1-236ENST00000522792 TKTP29401 623 aaKnown RBP16.33■□□□□ 0.2
CTNNA1-236ENST00000522792 OR1G1P47890 313 aa16.33■□□□□ 0.2
CTNNA1-236ENST00000522792 MARCKSL1P49006 195 aa16.33■□□□□ 0.2
CTNNA1-236ENST00000522792 DAB2IPQ5VWQ8 1189 aa16.33■□□□□ 0.2
CTNNA1-236ENST00000522792 DCLRE1AQ6PJP8 1040 aa16.33■□□□□ 0.2
CTNNA1-236ENST00000522792 TMEM86AQ8N2M4 240 aa16.33■□□□□ 0.2
CTNNA1-236ENST00000522792 MSANTD4Q8NCY6 345 aa16.33■□□□□ 0.2
CTNNA1-236ENST00000522792 UBXN4Q92575 508 aa16.33■□□□□ 0.2
CTNNA1-236ENST00000522792 KRT35Q92764 455 aa16.33■□□□□ 0.2
CTNNA1-236ENST00000522792 GOLGA1Q92805 767 aa16.33■□□□□ 0.2
CTNNA1-236ENST00000522792 STRIP2Q9ULQ0 834 aa16.33■□□□□ 0.2
CTNNA1-236ENST00000522792 CEP104O60308 925 aa16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 PTPN1P18031 435 aaKnown RBP16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 PDE4CQ08493 712 aa16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 DSC1Q08554 894 aa16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 C2orf54Q08AI8 447 aa16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 PKDCCQ504Y2 493 aa16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 MDH1BQ5I0G3 518 aa16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 DCUN1D2Q6PH85 259 aa16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 XYLT1Q86Y38 959 aa16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 COLGALT2Q8IYK4 626 aa16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 C3orf20Q8ND61 904 aa16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 RSPH1Q8WYR4 309 aa16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 FAM193BQ96PV7 902 aaPredicted RBP16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 SELENOOQ9BVL4 669 aa16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 DNAI2Q9GZS0 605 aa16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 EPC1Q9H2F5 836 aa16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 PRDM5Q9NQX1 630 aaPredicted RBP16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 PRG3Q9Y2Y8 225 aaPredicted RBP16.32■□□□□ 0.2
CTNNA1-236ENST00000522792 E5RJQ4 531 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 CLDN5O00501 218 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 ZNF211Q13398 564 aaPredicted RBP16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 DCAF12L1Q5VU92 463 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 PMF1Q6P1K2 205 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 RSRC2Q7L4I2 434 aaKnown RBP16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 NOA1Q8NC60 698 aaKnown RBP16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 IPO4Q8TEX9 1081 aaKnown RBP16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 ALG3Q92685 438 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 SYT15Q9BQS2 421 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 TMEM106CQ9BVX2 250 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 KANSL3Q9P2N6 904 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 HCSTQ9UBK5 93 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 USTQ9Y2C2 406 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 TMEM191CA6NGB0 347 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 PROSCO94903 275 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 PARNO95453 639 aaKnown RBP16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 FAM163BP0C2L3 166 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 PAFAH1B1P43034 410 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 LHX1P48742 406 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 CFAP221Q4G0U5 840 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 PPP1R15BQ5SWA1 713 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 JOSD2Q8TAC2 188 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 CD101Q93033 1021 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 PBKQ96KB5 322 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 CASD1Q96PB1 797 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 CRTAC1Q9NQ79 661 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 METTL5Q9NRN9 209 aaKnown RBP16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 TSC2P49815 1807 aa16.31■□□□□ 0.2
CTNNA1-236ENST00000522792 MIF4GDA9UHW6 222 aaKnown RBP16.3■□□□□ 0.2
CTNNA1-236ENST00000522792 DYNC1I1O14576 645 aa16.3■□□□□ 0.2
CTNNA1-236ENST00000522792 GABRB2P47870 512 aa16.3■□□□□ 0.2
CTNNA1-236ENST00000522792 BCAT1P54687 386 aa16.3■□□□□ 0.2
CTNNA1-236ENST00000522792 OGDHQ02218 1023 aa16.3■□□□□ 0.2
CTNNA1-236ENST00000522792 ZNF252P-AS1Q0IIN9 211 aa16.3■□□□□ 0.2
CTNNA1-236ENST00000522792 BST2Q10589 180 aaKnown RBP16.3■□□□□ 0.2
CTNNA1-236ENST00000522792 FAM183BPQ6ZVS7 135 aa16.3■□□□□ 0.2
CTNNA1-236ENST00000522792 NECAB2Q7Z6G3 386 aa16.3■□□□□ 0.2
CTNNA1-236ENST00000522792 METTL23Q86XA0 190 aa16.3■□□□□ 0.2
CTNNA1-236ENST00000522792 FUKQ8N0W3 1084 aa16.3■□□□□ 0.2
CTNNA1-236ENST00000522792 UBL4BQ8N7F7 174 aa16.3■□□□□ 0.2
CTNNA1-236ENST00000522792 ANKRD52Q8NB46 1076 aa16.3■□□□□ 0.2
CTNNA1-236ENST00000522792 SLC35F5Q8WV83 523 aa16.3■□□□□ 0.2
CTNNA1-236ENST00000522792 MED10Q9BTT4 135 aa16.3■□□□□ 0.2
CTNNA1-236ENST00000522792 MYBPHLA2RUH7 354 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 M0QZQ0 153 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 UPP2O95045 317 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 SETSIPP0DME0 302 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 KRT3P12035 628 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 ITGB8P26012 769 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 RFC1P35251 1148 aaPredicted RBP16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 ZNF268Q14587 947 aaPredicted RBP16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 OR6B2Q6IFH4 312 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 EMC1Q8N766 993 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 VWCEQ96DN2 955 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 SUSD3Q96L08 255 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 RTP3Q9BQQ7 232 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 NRDE2Q9H7Z3 1164 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 WDR35Q9P2L0 1181 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 IP6K2Q9UHH9 426 aa16.29■□□□□ 0.2
CTNNA1-236ENST00000522792 TBKBP1A7MCY6 615 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms