RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 SLC2A14Q8TDB8 520 aa25.65■■□□□ 1.7
PVT1-212ENST00000521951 EPS8L1Q8TE68 723 aa25.65■■□□□ 1.7
PVT1-212ENST00000521951 HNRNPABQ99729 332 aaKnown RBP25.65■■□□□ 1.7
PVT1-212ENST00000521951 LMCD1Q9NZU5 365 aa25.65■■□□□ 1.7
PVT1-212ENST00000521951 PCDHB5Q9Y5E4 795 aa25.65■■□□□ 1.7
PVT1-212ENST00000521951 PTPRDP23468 1912 aa25.64■■□□□ 1.7
PVT1-212ENST00000521951 MTMR11A4FU01 709 aa25.64■■□□□ 1.7
PVT1-212ENST00000521951 O00370 1275 aa25.64■■□□□ 1.7
PVT1-212ENST00000521951 CLASP2O75122 1294 aaKnown RBP25.64■■□□□ 1.7
PVT1-212ENST00000521951 SKILP12757 684 aa25.64■■□□□ 1.7
PVT1-212ENST00000521951 PRKCIP41743 596 aa25.64■■□□□ 1.7
PVT1-212ENST00000521951 PDE6CP51160 858 aa25.64■■□□□ 1.7
PVT1-212ENST00000521951 CNGA2Q16280 664 aa25.64■■□□□ 1.7
PVT1-212ENST00000521951 C4orf50Q6ZRC1 276 aa25.64■■□□□ 1.7
PVT1-212ENST00000521951 SPATA2LQ8IUW3 424 aaPredicted RBP25.64■■□□□ 1.7
PVT1-212ENST00000521951 ATAD1Q8NBU5 361 aa25.64■■□□□ 1.7
PVT1-212ENST00000521951 DDX1Q92499 740 aaKnown RBP25.64■■□□□ 1.7
PVT1-212ENST00000521951 MED10Q9BTT4 135 aa25.64■■□□□ 1.7
PVT1-212ENST00000521951 AFF4Q9UHB7 1163 aaKnown RBP25.64■■□□□ 1.7
PVT1-212ENST00000521951 NOCTQ9UK39 431 aaKnown RBP25.64■■□□□ 1.7
PVT1-212ENST00000521951 PLXNA3P51805 1871 aa25.64■■□□□ 1.7
PVT1-212ENST00000521951 GOLGA6L6A8MZA4 724 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 PER2O15055 1255 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 ADORA2BP29275 332 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 ADCY1Q08828 1119 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 TSR1Q2NL82 804 aaKnown RBP25.63■■□□□ 1.69
PVT1-212ENST00000521951 GPR153Q6NV75 609 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 LILRA6Q6PI73 481 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 RBM23Q86U06 439 aaKnown RBP25.63■■□□□ 1.69
PVT1-212ENST00000521951 C2orf15Q8WU43 125 aaKnown RBP25.63■■□□□ 1.69
PVT1-212ENST00000521951 SLC20A1Q8WUM9 679 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 ZNF518BQ9C0D4 1074 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 TLE6Q9H808 572 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 ABI2Q9NYB9 513 aaPredicted RBP25.63■■□□□ 1.69
PVT1-212ENST00000521951 MYH10P35580 1976 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 MED7O43513 233 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 TGM5O43548 720 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 ATF2P15336 505 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 SSTR3P32745 418 aaPredicted RBP25.63■■□□□ 1.69
PVT1-212ENST00000521951 KLHL30Q0D2K2 578 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 STILQ15468 1287 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 TAF3Q5VWG9 929 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 HGSNATQ68CP4 663 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 WDR59Q6PJI9 974 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 LCLAT1Q6UWP7 414 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 FAM35AQ86V20 835 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 SPPL2BQ8TCT7 592 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 FUBP3Q96I24 572 aaKnown RBP eCLIP25.63■■□□□ 1.69
PVT1-212ENST00000521951 PDLIM2Q96JY6 352 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 RHOBTB2Q9BYZ6 727 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 HAUS4Q9H6D7 363 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 TSPAN16Q9UKR8 245 aa25.63■■□□□ 1.69
PVT1-212ENST00000521951 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.63■■□□□ 1.69
PVT1-212ENST00000521951 CFHP08603 1231 aa25.62■■□□□ 1.69
PVT1-212ENST00000521951 CHRNB2P17787 502 aa25.62■■□□□ 1.69
PVT1-212ENST00000521951 BDNFP23560 247 aa25.62■■□□□ 1.69
PVT1-212ENST00000521951 CLCN4P51793 760 aa25.62■■□□□ 1.69
PVT1-212ENST00000521951 ADGRE1Q14246 886 aa25.62■■□□□ 1.69
PVT1-212ENST00000521951 GOLGA7BQ2TAP0 167 aa25.62■■□□□ 1.69
PVT1-212ENST00000521951 CFAP221Q4G0U5 840 aa25.62■■□□□ 1.69
PVT1-212ENST00000521951 ZNF677Q86XU0 584 aa25.62■■□□□ 1.69
PVT1-212ENST00000521951 CRISPLD1Q9H336 500 aa25.62■■□□□ 1.69
PVT1-212ENST00000521951 ZNHIT6Q9NWK9 470 aaKnown RBP25.62■■□□□ 1.69
PVT1-212ENST00000521951 MTCL1Q9Y4B5 1905 aaKnown RBP25.62■■□□□ 1.69
PVT1-212ENST00000521951 PRRC2BQ5JSZ5 2229 aaKnown RBP25.61■■□□□ 1.69
PVT1-212ENST00000521951 CDH23Q9H251 3354 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 MICAL2O94851 1124 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 SEC24AO95486 1093 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 GLUD1P00367 558 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 SERPING1P05155 500 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 SPATA31D3P0C874 917 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 POU3F3P20264 500 aaPredicted RBP25.61■■□□□ 1.69
PVT1-212ENST00000521951 CYP2F1P24903 491 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 NRIP1P48552 1158 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 DUSP4Q13115 394 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 DUSP6Q16828 381 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 SPATA31D4Q6ZUB0 917 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 CCDC186Q7Z3E2 898 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 TTC9BQ8N6N2 239 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 SLC22A17Q8WUG5 538 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 PANX2Q96RD6 677 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 NSUN3Q9H649 340 aaKnown RBP25.61■■□□□ 1.69
PVT1-212ENST00000521951 ABCB6Q9NP58 842 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 PCDHGC3Q9UN70 934 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 SLC27A5Q9Y2P5 690 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 MTCH2Q9Y6C9 303 aa25.61■■□□□ 1.69
PVT1-212ENST00000521951 C1RP00736 705 aa25.6■■□□□ 1.69
PVT1-212ENST00000521951 MMEP08473 750 aa25.6■■□□□ 1.69
PVT1-212ENST00000521951 CDR2Q01850 454 aa25.6■■□□□ 1.69
PVT1-212ENST00000521951 MEA1Q16626 185 aa25.6■■□□□ 1.69
PVT1-212ENST00000521951 Q7L0L9 218 aa25.6■■□□□ 1.69
PVT1-212ENST00000521951 ZNF571Q7Z3V5 609 aaPredicted RBP25.6■■□□□ 1.69
PVT1-212ENST00000521951 TTC30AQ86WT1 665 aa25.6■■□□□ 1.69
PVT1-212ENST00000521951 ANKRD52Q8NB46 1076 aa25.6■■□□□ 1.69
PVT1-212ENST00000521951 AGPAT1Q99943 283 aa25.6■■□□□ 1.69
PVT1-212ENST00000521951 SYT11Q9BT88 431 aa25.6■■□□□ 1.69
PVT1-212ENST00000521951 HESX1Q9UBX0 185 aa25.6■■□□□ 1.69
PVT1-212ENST00000521951 MAFFQ9ULX9 164 aa25.6■■□□□ 1.69
PVT1-212ENST00000521951 BZW2Q9Y6E2 419 aaKnown RBP25.6■■□□□ 1.69
PVT1-212ENST00000521951 ATP8B3O60423 1300 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms