RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ZNF280DQ6N043 979 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 EGFL8Q99944 293 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 SLC15A5A6NIM6 579 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 F5H423 210 aaPredicted RBP16.88■□□□□ 0.29
USP42-207ENST00000521713 IRF6O14896 467 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 TMCC1O94876 653 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 TYK2P29597 1187 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 FSCN1Q16658 493 aaKnown RBP16.88■□□□□ 0.29
USP42-207ENST00000521713 DEFB115Q30KQ5 88 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 RABGAP1LQ5R372 815 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 ACAD10Q6JQN1 1059 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 NOD2Q9HC29 1040 aa16.88■□□□□ 0.29
USP42-207ENST00000521713 ZNF197O14709 1029 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 ACO1P21399 889 aaKnown RBP16.87■□□□□ 0.29
USP42-207ENST00000521713 PSEN2P49810 448 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 SDE2Q6IQ49 451 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 TC2NQ8N9U0 490 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 HACD3Q9P035 362 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 AMACRQ9UHK6 382 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 PHF2O75151 1096 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 GYPCP04921 128 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 ALDH2P05091 517 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 SLC20A2Q08357 652 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 ZPBP2Q6X784 338 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 IL1RAPL1Q9NZN1 696 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 PAK5Q9P286 719 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 TMEM247A6NEH6 219 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 FAM86B1E9PN63 330 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 FAM86B2P0C5J1 330 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 CYP24A1Q07973 514 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 CTXN3Q4LDR2 81 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 DPF3Q92784 378 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 PRMT1Q99873 361 aaKnown RBP16.87■□□□□ 0.29
USP42-207ENST00000521713 KLHL11Q9NVR0 708 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 STX18Q9P2W9 335 aaKnown RBP16.87■□□□□ 0.29
USP42-207ENST00000521713 PLAGL2Q9UPG8 496 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 L3MBTL1Q9Y468 752 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 DNAJC6O75061 913 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 COMTP21964 271 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 SESN2P58004 480 aaPredicted RBP16.87■□□□□ 0.29
USP42-207ENST00000521713 ADGRF2Q8IZF7 708 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 TMCO5AQ8N6Q1 288 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 C1orf131Q8NDD1 294 aaKnown RBP16.87■□□□□ 0.29
USP42-207ENST00000521713 FUT8Q9BYC5 575 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 SLC13A4Q9UKG4 626 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 ALG6Q9Y672 507 aa16.87■□□□□ 0.29
USP42-207ENST00000521713 C3P01024 1663 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 VHLP40337 213 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 BCAT1P54687 386 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 GTF2H3Q13889 308 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 CNGA3Q16281 694 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 POTEAQ6S8J7 498 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 TINF2Q9BSI4 451 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 RAB6BQ9NRW1 208 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 OLA1Q9NTK5 396 aaKnown RBP16.86■□□□□ 0.29
USP42-207ENST00000521713 MAGEA13PA6NCF6 341 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 APRTP07741 180 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 TMED10P49755 219 aaKnown RBP16.86■□□□□ 0.29
USP42-207ENST00000521713 TTI2Q6NXR4 508 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 LONP2Q86WA8 852 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 SCFD1Q8WVM8 642 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 SH3KBP1Q96B97 665 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 ASB7Q9H672 318 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 METTL5Q9NRN9 209 aaKnown RBP16.86■□□□□ 0.29
USP42-207ENST00000521713 ZNF212Q9UDV6 495 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 PCDHB12Q9Y5F1 795 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 DAB1O75553 588 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 IRF1P10914 325 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 ITIH2P19823 946 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 PON1P27169 355 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 LRRC14Q15048 493 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 SLC27A1Q6PCB7 646 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 RIBC1Q8N443 379 aaPredicted RBP16.86■□□□□ 0.29
USP42-207ENST00000521713 SH2D3CQ8N5H7 860 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 DNAJB3Q8WWF6 145 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 TSSK1BQ9BXA7 367 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 CCDC134Q9H6E4 229 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 ITGA11Q9UKX5 1188 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 SLC30A1Q9Y6M5 507 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 SLITRK3O94933 977 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 FBXO21O94952 628 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 SYF2O95926 243 aaKnown RBP16.86■□□□□ 0.29
USP42-207ENST00000521713 VSIG10LQ86VR7 867 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 KIRREL3Q8IZU9 778 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 CYP2W1Q8TAV3 490 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 PBXIP1Q96AQ6 731 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 HIC2Q96JB3 615 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 KCNK16Q96T55 309 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 RNF208Q9H0X6 261 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 C10orf88Q9H8K7 445 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 DDIT4Q9NX09 232 aa16.86■□□□□ 0.29
USP42-207ENST00000521713 ZMYM2Q9UBW7 1377 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 ARHGEF7Q14155 803 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 ITIH4Q14624 930 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 GRIK5Q16478 980 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 FIGNQ5HY92 759 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 FBXO47Q5MNV8 452 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 KIAA2013Q8IYS2 634 aa16.85■□□□□ 0.29
USP42-207ENST00000521713 G3BP2Q9UN86 482 aaKnown RBP16.85■□□□□ 0.29
USP42-207ENST00000521713 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms