RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 CYP4F8P98187 520 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 MAPRE1Q15691 268 aaKnown RBP19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 EDRF1Q3B7T1 1238 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 ARHGAP15Q53QZ3 475 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 COBLL1Q53SF7 1204 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 ZNF667Q5HYK9 610 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 INTS8Q75QN2 995 aaKnown RBP19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 ARID3BQ8IVW6 561 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 MFSD6LQ8IWD5 586 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 SCN4BQ8IWT1 228 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 MYCBPAPQ8TBZ2 947 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 RSPRY1Q96DX4 576 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 EEF2KMTQ96G04 330 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 PCED1BQ96HM7 432 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 TRMT61BQ9BVS5 477 aaKnown RBP19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 TASP1Q9H6P5 420 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 SMYD3Q9H7B4 428 aa19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 MAGED2Q9UNF1 606 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC9-211ENST00000521700 COL4A3Q01955 1670 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 SLC38A8A6NNN8 435 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 HEPACAM2A8MVW5 462 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 A8MXQ7 604 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 GALR2O43603 387 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 TRIM49P0CI25 452 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 TRIM49CP0CI26 452 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 KRT13P13646 458 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 PTPN1P18031 435 aaKnown RBP19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 RFX1P22670 979 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 BDNFP23560 247 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 NLRP12P59046 1061 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 MCCD1P59942 119 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 CYP27A1Q02318 531 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 NHLH1Q02575 133 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 PPP3CAQ08209 521 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 MLF2Q15773 248 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 SGSM1Q2NKQ1 1148 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 MDH1BQ5I0G3 518 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 E2F7Q96AV8 911 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 SHDQ96IW2 340 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 GCNAQ96QF7 691 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 SLC46A2Q9BY10 475 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 SDCBP2Q9H190 292 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 DPEP3Q9H4B8 488 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 BRD9Q9H8M2 597 aa19.09■□□□□ 0.65
TRAPPC9-211ENST00000521700 DENND4CQ5VZ89 1909 aa19.08■□□□□ 0.65
TRAPPC9-211ENST00000521700 KINO60870 393 aaKnown RBP19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 NOL4O94818 638 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 ASS1P00966 412 aaKnown RBP19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 HLA-DRAP01903 254 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 GDI1P31150 447 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 RAP1GAPP47736 663 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 GCLMP48507 274 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 PTPN5P54829 565 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 PRKCQQ04759 706 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 ENPEPQ07075 957 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 ISM2Q6H9L7 571 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 VSTM1Q6UX27 236 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 ADSSL1Q8N142 457 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 DEPDC1BQ8WUY9 529 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 TAF4BQ92750 862 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 MYRFLQ96LU7 910 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 LRRC3BQ96PB8 259 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 DDX23Q9BUQ8 820 aaKnown RBP19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 FOXQ1Q9C009 403 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 CHMP5Q9NZZ3 219 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 WDFY4Q6ZS81 3184 aa19.08■□□□□ 0.64
TRAPPC9-211ENST00000521700 PIEZO1Q92508 2521 aa19.07■□□□□ 0.64
TRAPPC9-211ENST00000521700 CETN3O15182 167 aa19.07■□□□□ 0.64
TRAPPC9-211ENST00000521700 CLSTN1O94985 981 aa19.07■□□□□ 0.64
TRAPPC9-211ENST00000521700 WEE1P30291 646 aa19.07■□□□□ 0.64
TRAPPC9-211ENST00000521700 PMS1P54277 932 aaKnown RBP19.07■□□□□ 0.64
TRAPPC9-211ENST00000521700 ANKRD40Q6AI12 368 aa19.07■□□□□ 0.64
TRAPPC9-211ENST00000521700 SPOPLQ6IQ16 392 aa19.07■□□□□ 0.64
TRAPPC9-211ENST00000521700 SCARA5Q6ZMJ2 495 aa19.07■□□□□ 0.64
TRAPPC9-211ENST00000521700 DNASE1L2Q92874 299 aa19.07■□□□□ 0.64
TRAPPC9-211ENST00000521700 IRF7Q92985 503 aa19.07■□□□□ 0.64
TRAPPC9-211ENST00000521700 TRMT2BQ96GJ1 504 aaKnown RBP19.07■□□□□ 0.64
TRAPPC9-211ENST00000521700 HEBP1Q9NRV9 189 aa19.07■□□□□ 0.64
TRAPPC9-211ENST00000521700 MAN1B1Q9UKM7 699 aa19.07■□□□□ 0.64
TRAPPC9-211ENST00000521700 SIT1Q9Y3P8 196 aa19.07■□□□□ 0.64
TRAPPC9-211ENST00000521700 PTPRDP23468 1912 aa19.07■□□□□ 0.64
TRAPPC9-211ENST00000521700 NUP210Q8TEM1 1887 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 KANSL1LA0AUZ9 987 aa19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 ZNF263O14978 683 aa19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 P4HA1P13674 534 aa19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 CD72P21854 359 aa19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 GRIK1P39086 918 aa19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 PIK3CAP42336 1068 aa19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 CCDC105Q8IYK2 499 aa19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 DTWD2Q8NBA8 298 aa19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 B3GALNT2Q8NCR0 500 aa19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 TAS1R2Q8TE23 839 aa19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 SPATA17Q96L03 361 aa19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 B3GNT5Q9BYG0 378 aa19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 GTPBP4Q9BZE4 634 aaKnown RBP19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 SMG9Q9H0W8 520 aaKnown RBP19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 MMRN2Q9H8L6 949 aa19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 TRPV5Q9NQA5 729 aa19.06■□□□□ 0.64
TRAPPC9-211ENST00000521700 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.06■□□□□ 0.642e-6■■■■■ 112.2
TRAPPC9-211ENST00000521700 UXTQ9UBK9 157 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms