RNA–Protein interactions for RNA: ENST00000521588.3

R3HCC1-207, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene R3HCC1, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-207ENST00000521588 RPN1P04843 607 aaKnown RBP20.68■□□□□ 0.9
R3HCC1-207ENST00000521588 MAGEA9P43362 315 aa20.68■□□□□ 0.9
R3HCC1-207ENST00000521588 MAGEA11P43364 429 aa20.68■□□□□ 0.9
R3HCC1-207ENST00000521588 CLDN10P78369 228 aa20.68■□□□□ 0.9
R3HCC1-207ENST00000521588 SDHAF4Q5VUM1 108 aa20.68■□□□□ 0.9
R3HCC1-207ENST00000521588 ASCL5Q7RTU5 278 aa20.68■□□□□ 0.9
R3HCC1-207ENST00000521588 MYRFLQ96LU7 910 aa20.68■□□□□ 0.9
R3HCC1-207ENST00000521588 SYT15Q9BQS2 421 aa20.68■□□□□ 0.9
R3HCC1-207ENST00000521588 XYLT2Q9H1B5 865 aa20.68■□□□□ 0.9
R3HCC1-207ENST00000521588 CRTAC1Q9NQ79 661 aa20.68■□□□□ 0.9
R3HCC1-207ENST00000521588 TICRRQ7Z2Z1 1910 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 PRR23AA6NEV1 266 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 SOBPA7XYQ1 873 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 NCAM2O15394 837 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 NOL4O94818 638 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 PRAMEF12O95522 483 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 RPS9P46781 194 aaKnown RBP20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 CASP4P49662 377 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 DPYDQ12882 1025 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 KRBA2Q6ZNG9 492 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 SPATA2LQ8IUW3 424 aaPredicted RBP20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 YAF2Q8IY57 180 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 FSIP1Q8NA03 581 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 STKLD1Q8NE28 680 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 TRMT2BQ96GJ1 504 aaKnown RBP20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 GCNAQ96QF7 691 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 MMS19Q96T76 1030 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 MRPL45Q9BRJ2 306 aaKnown RBP20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 GOLPH3LQ9H4A5 285 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 NME7Q9Y5B8 376 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 PIAS3Q9Y6X2 628 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 EP300Q09472 2414 aaPredicted RBP20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 CFAP54Q96N23 3096 aa20.67■□□□□ 0.9
R3HCC1-207ENST00000521588 SLC38A8A6NNN8 435 aa20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 RHOBTB3O94955 611 aa20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 PDGFRBP09619 1106 aa20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 PRR29P0C7W0 189 aa20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 SP9P0CG40 484 aa20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 DDX6P26196 483 aaKnown RBP eCLIP20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 ATICP31939 592 aa20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 GNL1P36915 607 aaPredicted RBP20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 AP3M2P53677 418 aa20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 MYL6P60660 151 aa20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 WDR72Q3MJ13 1102 aa20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 ARHGAP29Q52LW3 1261 aa20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 C4orf50Q6ZRC1 276 aa20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 CMTM8Q8IZV2 173 aa20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 NKD2Q969F2 451 aaPredicted RBP20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 VRTNQ9H8Y1 702 aa20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 MAGEC2Q9UBF1 373 aaPredicted RBP20.66■□□□□ 0.9
R3HCC1-207ENST00000521588 LRRIQ3A6PVS8 624 aaPredicted RBP20.65■□□□□ 0.9
R3HCC1-207ENST00000521588 DPYSL4O14531 572 aa20.65■□□□□ 0.9
R3HCC1-207ENST00000521588 C4BPAP04003 597 aaKnown RBP20.65■□□□□ 0.9
R3HCC1-207ENST00000521588 PSMC1P62191 440 aaKnown RBP20.65■□□□□ 0.9
R3HCC1-207ENST00000521588 TRPC3Q13507 836 aa20.65■□□□□ 0.9
R3HCC1-207ENST00000521588 MAPRE1Q15691 268 aaKnown RBP20.65■□□□□ 0.9
R3HCC1-207ENST00000521588 MON1AQ86VX9 555 aa20.65■□□□□ 0.9
R3HCC1-207ENST00000521588 CELF5Q8N6W0 485 aaKnown RBP20.65■□□□□ 0.9
R3HCC1-207ENST00000521588 MYCBPAPQ8TBZ2 947 aa20.65■□□□□ 0.9
R3HCC1-207ENST00000521588 FAM3CQ92520 227 aa20.65■□□□□ 0.9
R3HCC1-207ENST00000521588 MYLPFQ96A32 169 aa20.65■□□□□ 0.9
R3HCC1-207ENST00000521588 SPATA6Q9NWH7 488 aaPredicted RBP20.65■□□□□ 0.9
R3HCC1-207ENST00000521588 UXTQ9UBK9 157 aaPredicted RBP20.65■□□□□ 0.9
R3HCC1-207ENST00000521588 MAGED2Q9UNF1 606 aaPredicted RBP20.65■□□□□ 0.9
R3HCC1-207ENST00000521588 TRAF3IP3Q9Y228 551 aa20.65■□□□□ 0.9
R3HCC1-207ENST00000521588 SPTBN4Q9H254 2564 aa20.64■□□□□ 0.9
R3HCC1-207ENST00000521588 TADA3O75528 432 aa20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 ZNF202O95125 648 aa20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 NR3C1P04150 777 aa20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 TDRD10Q5VZ19 366 aaKnown RBP20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 TXNDC8Q6A555 127 aa20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 VSTM1Q6UX27 236 aa20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 MAB21L3Q8N8X9 362 aa20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 BPIFB1Q8TDL5 484 aa20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 CSGALNACT1Q8TDX6 532 aa20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 MRPS31Q92665 395 aaKnown RBP20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 SYAP1Q96A49 352 aaPredicted RBP20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 MSANTD3Q96H12 275 aa20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 SMG9Q9H0W8 520 aaKnown RBP20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 SNX25Q9H3E2 840 aa20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 C8orf33Q9H7E9 229 aaPredicted RBP20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 GDPD2Q9HCC8 539 aa20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 FBXO4Q9UKT5 387 aa20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 NDRG2Q9UN36 371 aaKnown RBP20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 OBSL1O75147 1896 aa20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 PATJQ8NI35 1801 aa20.64■□□□□ 0.89
R3HCC1-207ENST00000521588 FANCMQ8IYD8 2048 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 TNNC1P63316 161 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 DLG4P78352 724 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 PLCB2Q00722 1185 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 BECN1Q14457 450 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 KCNB1Q14721 858 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 ZNF528Q3MIS6 628 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 MAMSTRQ6ZN01 415 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 SCN4BQ8IWT1 228 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 OR6B3Q8NGW1 331 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 TMC2Q8TDI7 906 aa20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 USP13Q92995 863 aaPredicted RBP20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 CCDC47Q96A33 483 aaKnown RBP20.63■□□□□ 0.89
R3HCC1-207ENST00000521588 PCED1BQ96HM7 432 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms