RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 CTAGE1Q96RT6 745 aa3.69□□□□□ -1.82
PCM1-214ENST00000521338 CAAP1Q9H8G2 361 aa3.69□□□□□ -1.82
PCM1-214ENST00000521338 SAP30BPQ9UHR5 308 aaKnown RBP3.69□□□□□ -1.82
PCM1-214ENST00000521338 SSX2IPQ9Y2D8 614 aa3.69□□□□□ -1.82
PCM1-214ENST00000521338 TMA7Q9Y2S6 64 aaKnown RBP3.69□□□□□ -1.82
PCM1-214ENST00000521338 TBX22Q9Y458 520 aa3.69□□□□□ -1.82
PCM1-214ENST00000521338 RAD54BQ9Y620 910 aa3.69□□□□□ -1.82
PCM1-214ENST00000521338 CADPSQ9ULU8 1353 aa3.68□□□□□ -1.82
PCM1-214ENST00000521338 ERVV-2B6SEH9 535 aa3.68□□□□□ -1.82
PCM1-214ENST00000521338 ENPP3O14638 875 aa3.68□□□□□ -1.82
PCM1-214ENST00000521338 C5AR1P21730 350 aa3.68□□□□□ -1.82
PCM1-214ENST00000521338 CYP2C19P33261 490 aa3.68□□□□□ -1.82
PCM1-214ENST00000521338 SRSF1Q07955 248 aaKnown RBP eCLIP3.68□□□□□ -1.82
PCM1-214ENST00000521338 HYAL1Q12794 435 aa3.68□□□□□ -1.82
PCM1-214ENST00000521338 KRTAP27-1Q3LI81 207 aa3.68□□□□□ -1.82
PCM1-214ENST00000521338 UBAP2Q5T6F2 1119 aaKnown RBP3.68□□□□□ -1.82
PCM1-214ENST00000521338 ICE2Q659A1 982 aa3.68□□□□□ -1.82
PCM1-214ENST00000521338 SDE2Q6IQ49 451 aa3.68□□□□□ -1.82
PCM1-214ENST00000521338 KIRREL2Q6UWL6 708 aa3.68□□□□□ -1.82
PCM1-214ENST00000521338 PARS2Q7L3T8 475 aaKnown RBP3.68□□□□□ -1.82
PCM1-214ENST00000521338 NSUN6Q8TEA1 469 aaKnown RBP3.68□□□□□ -1.82
PCM1-214ENST00000521338 JADE3Q92613 823 aa3.68□□□□□ -1.82
PCM1-214ENST00000521338 KAT5Q92993 513 aa3.68□□□□□ -1.82
PCM1-214ENST00000521338 VRK1Q99986 396 aaPredicted RBP3.68□□□□□ -1.82
PCM1-214ENST00000521338 FAM118BQ9BPY3 351 aa3.68□□□□□ -1.82
PCM1-214ENST00000521338 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 TCRBV5S1A1TA0A578 114 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 GPR39O43194 453 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 TOMM40O96008 361 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 FESP07332 822 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 CHRM5P08912 532 aaPredicted RBP3.67□□□□□ -1.82
PCM1-214ENST00000521338 NPSP0C0P6 89 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 SCP2P22307 547 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 SEMA3AQ14563 771 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 KIF22Q14807 665 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 KHDC1Q4VXA5 237 aaKnown RBP3.67□□□□□ -1.82
PCM1-214ENST00000521338 TMEM108Q6UXF1 575 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 ZNF813Q6ZN06 617 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 Q6ZWC4 215 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 FAM177A1Q8N128 213 aaPredicted RBP3.67□□□□□ -1.82
PCM1-214ENST00000521338 ZNF398Q8TD17 642 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 COG1Q8WTW3 980 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 DAZAP1Q96EP5 407 aaKnown RBP3.67□□□□□ -1.82
PCM1-214ENST00000521338 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 VPS33BQ9H267 617 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 FOXP1Q9H334 677 aaPredicted RBP3.67□□□□□ -1.82
PCM1-214ENST00000521338 CFAP97Q9P2B7 532 aa3.67□□□□□ -1.82
PCM1-214ENST00000521338 CCDC154A6NI56 674 aa3.66□□□□□ -1.82
PCM1-214ENST00000521338 PRSS44E7EML9 344 aa3.66□□□□□ -1.82
PCM1-214ENST00000521338 PDE8BO95263 885 aa3.66□□□□□ -1.82
PCM1-214ENST00000521338 MT3P25713 68 aa3.66□□□□□ -1.82
PCM1-214ENST00000521338 DSC2Q02487 901 aa3.66□□□□□ -1.82
PCM1-214ENST00000521338 KLF1Q13351 362 aaPredicted RBP3.66□□□□□ -1.82
PCM1-214ENST00000521338 GTF2H3Q13889 308 aa3.66□□□□□ -1.82
PCM1-214ENST00000521338 INAVAQ3KP66 663 aa3.66□□□□□ -1.82
PCM1-214ENST00000521338 SFRP4Q6FHJ7 346 aaPredicted RBP3.66□□□□□ -1.82
PCM1-214ENST00000521338 SLC4A10Q6U841 1118 aa3.66□□□□□ -1.82
PCM1-214ENST00000521338 FAM90A1Q86YD7 464 aa3.66□□□□□ -1.82
PCM1-214ENST00000521338 LRRC71Q8N4P6 559 aa3.66□□□□□ -1.82
PCM1-214ENST00000521338 TERB1Q8NA31 727 aa3.66□□□□□ -1.82
PCM1-214ENST00000521338 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.66□□□□□ -1.82
PCM1-214ENST00000521338 LENG8Q96PV6 779 aaPredicted RBP3.66□□□□□ -1.82
PCM1-214ENST00000521338 SNX18Q96RF0 628 aa3.66□□□□□ -1.82
PCM1-214ENST00000521338 SLKQ9H2G2 1235 aaPredicted RBP3.66□□□□□ -1.82
PCM1-214ENST00000521338 HIPK2Q9H2X6 1198 aa3.66□□□□□ -1.82
PCM1-214ENST00000521338 GABRQQ9UN88 632 aa3.66□□□□□ -1.82
PCM1-214ENST00000521338 PROCRQ9UNN8 238 aa3.66□□□□□ -1.82
PCM1-214ENST00000521338 DCLK1O15075 740 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 ERC2O15083 957 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 KRT86O43790 486 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 USP1O94782 785 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 CLSTN1O94985 981 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 RARBP10826 455 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 SOX5P35711 763 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 PHKA1P46020 1223 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 FXR1P51114 621 aaKnown RBP eCLIP3.65□□□□□ -1.837e-7■■■■□ 19.6
PCM1-214ENST00000521338 PDE1AP54750 535 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 KRTAP10-5P60370 271 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 KRT81Q14533 505 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 CERKLQ49MI3 558 aaPredicted RBP3.65□□□□□ -1.83
PCM1-214ENST00000521338 USP37Q86T82 979 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 ATG4AQ8WYN0 398 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 GLG1Q92896 1179 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 COA7Q96BR5 231 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 C1orf43Q9BWL3 253 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 SERTAD3Q9UJW9 196 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 WASHC2AQ641Q2 1341 aa3.65□□□□□ -1.83
PCM1-214ENST00000521338 A1L4Q6 167 aa3.64□□□□□ -1.83
PCM1-214ENST00000521338 A1BGP04217 495 aa3.64□□□□□ -1.83
PCM1-214ENST00000521338 GNAI3P08754 354 aa3.64□□□□□ -1.83
PCM1-214ENST00000521338 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
PCM1-214ENST00000521338 PRDX5P30044 214 aa3.64□□□□□ -1.83
PCM1-214ENST00000521338 KCNJ5P48544 419 aa3.64□□□□□ -1.83
PCM1-214ENST00000521338 RENBPP51606 427 aa3.64□□□□□ -1.83
PCM1-214ENST00000521338 SLC16A1P53985 500 aa3.64□□□□□ -1.83
PCM1-214ENST00000521338 GNAI1P63096 354 aa3.64□□□□□ -1.83
PCM1-214ENST00000521338 PPP4R3AQ6IN85 833 aa3.64□□□□□ -1.83
PCM1-214ENST00000521338 SPATS2Q86XZ4 545 aaKnown RBP3.64□□□□□ -1.83
PCM1-214ENST00000521338 TRMOQ9BU70 441 aa3.64□□□□□ -1.83
PCM1-214ENST00000521338 SIK2Q9H0K1 926 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms