RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 STX10O60499 249 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 LRRN2O75325 713 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 FGF19O95750 216 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 SRFP11831 508 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 HMGA1P17096 107 aaKnown RBP22.03■■□□□ 1.12
TRIM35-203ENST00000521253 MAGEA11P43364 429 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 ASPAP45381 313 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 RPL10AP62906 217 aaKnown RBP22.03■■□□□ 1.12
TRIM35-203ENST00000521253 NOP14P78316 857 aaKnown RBP22.03■■□□□ 1.12
TRIM35-203ENST00000521253 CYP27A1Q02318 531 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 DCAF17Q5H9S7 520 aaPredicted RBP22.03■■□□□ 1.12
TRIM35-203ENST00000521253 TCERG1LQ5VWI1 586 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 FOXR2Q6PJQ5 311 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 CEP63Q96MT8 703 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 ASB16Q96NS5 453 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 IMPG2Q9BZV3 1241 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 ATXN3LQ9H3M9 355 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 CLSTN2Q9H4D0 955 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 SLITRK6Q9H5Y7 841 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 IL21Q9HBE4 155 aa22.03■■□□□ 1.12
TRIM35-203ENST00000521253 ARMCX3Q9UH62 379 aaPredicted RBP22.03■■□□□ 1.12
TRIM35-203ENST00000521253 BICDL2A1A5D9 508 aa22.02■■□□□ 1.12
TRIM35-203ENST00000521253 ECI2O75521 394 aa22.02■■□□□ 1.12
TRIM35-203ENST00000521253 PDGFBP01127 241 aaPredicted RBP22.02■■□□□ 1.12
TRIM35-203ENST00000521253 BDNFP23560 247 aa22.02■■□□□ 1.12
TRIM35-203ENST00000521253 FCARP24071 287 aa22.02■■□□□ 1.12
TRIM35-203ENST00000521253 STX17P56962 302 aa22.02■■□□□ 1.12
TRIM35-203ENST00000521253 PAK1Q13153 545 aa22.02■■□□□ 1.12
TRIM35-203ENST00000521253 STXBP5Q5T5C0 1151 aa22.02■■□□□ 1.12
TRIM35-203ENST00000521253 TANGO2Q6ICL3 276 aa22.02■■□□□ 1.12
TRIM35-203ENST00000521253 SCN4BQ8IWT1 228 aa22.02■■□□□ 1.12
TRIM35-203ENST00000521253 B3GALNT2Q8NCR0 500 aa22.02■■□□□ 1.12
TRIM35-203ENST00000521253 SEMA4DQ92854 862 aa22.02■■□□□ 1.12
TRIM35-203ENST00000521253 GBP4Q96PP9 640 aa22.02■■□□□ 1.12
TRIM35-203ENST00000521253 CFHP08603 1231 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 CSH1P0DML2 217 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 CSH2P0DML3 217 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 COL9A1P20849 921 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 CBWD6Q4V339 395 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 CBWD3Q5JTY5 395 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 CBWD5Q5RIA9 395 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 VSTM1Q6UX27 236 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 FILIP1Q7Z7B0 1213 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 FBXL13Q8NEE6 735 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 ZSCAN18Q8TBC5 510 aaPredicted RBP22.01■■□□□ 1.11
TRIM35-203ENST00000521253 SMARCD2Q92925 531 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 SLC35C1Q96A29 364 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 ELSPBP1Q96BH3 223 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 BCO2Q9BYV7 579 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 PLA2G2FQ9BZM2 168 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 GPR88Q9GZN0 384 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 METTL14Q9HCE5 456 aaKnown RBP22.01■■□□□ 1.11
TRIM35-203ENST00000521253 FBXL21Q9UKT6 434 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 ZDBF2Q9HCK1 2354 aa22.01■■□□□ 1.11
TRIM35-203ENST00000521253 SLC38A8A6NNN8 435 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 NOL4O94818 638 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 CDC25CP30307 473 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 GPC5P78333 572 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 CYP4F8P98187 520 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 FRMD5Q7Z6J6 570 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 FBXL6Q8N531 539 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 CCDC150Q8NCX0 1101 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 GCNAQ96QF7 691 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 B3GNT5Q9BYG0 378 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 NIF3L1Q9GZT8 377 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 ZFP14Q9HCL3 533 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 SLC2A4RGQ9NR83 387 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 RAB20Q9NX57 234 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 HMGXB4Q9UGU5 601 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 RAPGEFL1Q9UHV5 662 aa22■■□□□ 1.11
TRIM35-203ENST00000521253 MAGED2Q9UNF1 606 aaPredicted RBP22■■□□□ 1.11
TRIM35-203ENST00000521253 GRIK1P39086 918 aa21.99■■□□□ 1.11
TRIM35-203ENST00000521253 NDST1P52848 882 aa21.99■■□□□ 1.11
TRIM35-203ENST00000521253 ORC1Q13415 861 aa21.99■■□□□ 1.11
TRIM35-203ENST00000521253 CCDC40Q4G0X9 1142 aa21.99■■□□□ 1.11
TRIM35-203ENST00000521253 ARHGAP15Q53QZ3 475 aa21.99■■□□□ 1.11
TRIM35-203ENST00000521253 GPR158Q5T848 1215 aa21.99■■□□□ 1.11
TRIM35-203ENST00000521253 TMEM150AQ86TG1 271 aa21.99■■□□□ 1.11
TRIM35-203ENST00000521253 TNIP3Q96KP6 325 aa21.99■■□□□ 1.11
TRIM35-203ENST00000521253 ZNF518BQ9C0D4 1074 aa21.99■■□□□ 1.11
TRIM35-203ENST00000521253 NUP62CLQ9H1M0 184 aa21.99■■□□□ 1.11
TRIM35-203ENST00000521253 TRPV4Q9HBA0 871 aa21.99■■□□□ 1.11
TRIM35-203ENST00000521253 WNT16Q9UBV4 365 aa21.99■■□□□ 1.11
TRIM35-203ENST00000521253 CLDN5O00501 218 aa21.98■■□□□ 1.11
TRIM35-203ENST00000521253 F11P03951 625 aa21.98■■□□□ 1.11
TRIM35-203ENST00000521253 VIPR2P41587 438 aa21.98■■□□□ 1.11
TRIM35-203ENST00000521253 CACNA2D1P54289 1103 aa21.98■■□□□ 1.11
TRIM35-203ENST00000521253 NLRP12P59046 1061 aa21.98■■□□□ 1.11
TRIM35-203ENST00000521253 INCA1Q0VD86 236 aa21.98■■□□□ 1.11
TRIM35-203ENST00000521253 ACOT1Q86TX2 421 aa21.98■■□□□ 1.11
TRIM35-203ENST00000521253 UNC93AQ86WB7 457 aa21.98■■□□□ 1.11
TRIM35-203ENST00000521253 SIX5Q8N196 739 aa21.98■■□□□ 1.11
TRIM35-203ENST00000521253 TRMT2BQ96GJ1 504 aaKnown RBP21.98■■□□□ 1.11
TRIM35-203ENST00000521253 SPATA17Q96L03 361 aa21.98■■□□□ 1.11
TRIM35-203ENST00000521253 MYRFLQ96LU7 910 aa21.98■■□□□ 1.11
TRIM35-203ENST00000521253 ELOVL4Q9GZR5 314 aa21.98■■□□□ 1.11
TRIM35-203ENST00000521253 CYP3A43Q9HB55 503 aa21.98■■□□□ 1.11
TRIM35-203ENST00000521253 TMEM30AQ9NV96 361 aa21.98■■□□□ 1.11
TRIM35-203ENST00000521253 COQ4Q9Y3A0 265 aa21.98■■□□□ 1.11
TRIM35-203ENST00000521253 F8VP50 259 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms