RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 ERP44Q9BS26 406 aa28.43■■■□□ 2.14
COL13A1-212ENST00000520133 LRRC19Q9H756 370 aa28.43■■■□□ 2.14
COL13A1-212ENST00000520133 METTL5Q9NRN9 209 aaKnown RBP28.43■■■□□ 2.14
COL13A1-212ENST00000520133 SPTLC1O15269 473 aa28.43■■■□□ 2.14
COL13A1-212ENST00000520133 SNX16P57768 344 aa28.43■■■□□ 2.14
COL13A1-212ENST00000520133 ODF2Q5BJF6 829 aa28.43■■■□□ 2.14
COL13A1-212ENST00000520133 ARHGAP17Q68EM7 881 aa28.43■■■□□ 2.14
COL13A1-212ENST00000520133 CCDC105Q8IYK2 499 aa28.43■■■□□ 2.14
COL13A1-212ENST00000520133 AGO3Q9H9G7 860 aaKnown RBP28.43■■■□□ 2.14
COL13A1-212ENST00000520133 DDX56Q9NY93 547 aaKnown RBP28.43■■■□□ 2.14
COL13A1-212ENST00000520133 PADI3Q9ULW8 664 aa28.43■■■□□ 2.14
COL13A1-212ENST00000520133 GIT1Q9Y2X7 761 aa28.43■■■□□ 2.14
COL13A1-212ENST00000520133 MOXD2PA6NHM9 499 aa28.42■■■□□ 2.14
COL13A1-212ENST00000520133 DAPK3O43293 454 aa28.42■■■□□ 2.14
COL13A1-212ENST00000520133 RAB27AP51159 221 aa28.42■■■□□ 2.14
COL13A1-212ENST00000520133 LILRA4P59901 499 aa28.42■■■□□ 2.14
COL13A1-212ENST00000520133 ARHGEF6Q15052 776 aa28.42■■■□□ 2.14
COL13A1-212ENST00000520133 ZFYVE27Q5T4F4 411 aa28.42■■■□□ 2.14
COL13A1-212ENST00000520133 CRYBG2Q8N1P7 616 aa28.42■■■□□ 2.14
COL13A1-212ENST00000520133 TOP6BLQ8N6T0 577 aa28.42■■■□□ 2.14
COL13A1-212ENST00000520133 JOSD2Q8TAC2 188 aa28.42■■■□□ 2.14
COL13A1-212ENST00000520133 KBTBD7Q8WVZ9 684 aa28.42■■■□□ 2.14
COL13A1-212ENST00000520133 GLT1D1Q96MS3 346 aa28.42■■■□□ 2.14
COL13A1-212ENST00000520133 TRIM51Q9BSJ1 452 aa28.42■■■□□ 2.14
COL13A1-212ENST00000520133 HOMER3Q9NSC5 361 aa28.42■■■□□ 2.14
COL13A1-212ENST00000520133 FAM49BQ9NUQ9 324 aa28.42■■■□□ 2.14
COL13A1-212ENST00000520133 NME7Q9Y5B8 376 aa28.42■■■□□ 2.14
COL13A1-212ENST00000520133 RALAP11233 206 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 OAS2P29728 719 aaKnown RBP28.41■■■□□ 2.14
COL13A1-212ENST00000520133 MLH1P40692 756 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 PTGIRP43119 386 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 PKDCCQ504Y2 493 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 LIMS2Q7Z4I7 341 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 DDX42Q86XP3 938 aaKnown RBP eCLIP28.41■■■□□ 2.14
COL13A1-212ENST00000520133 OSBPL8Q9BZF1 889 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 MED4Q9NPJ6 270 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 THP07101 528 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 PFKMP08237 780 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 FAM163BP0C2L3 166 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 CD52P31358 61 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 AARSP49588 968 aaKnown RBP eCLIP28.41■■■□□ 2.14
COL13A1-212ENST00000520133 ACAP1Q15027 740 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 HADHQ16836 314 aaKnown RBP28.41■■■□□ 2.14
COL13A1-212ENST00000520133 FAM102AQ5T9C2 384 aaPredicted RBP28.41■■■□□ 2.14
COL13A1-212ENST00000520133 DUPD1Q68J44 220 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 TTC27Q6P3X3 843 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 POLNQ7Z5Q5 900 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 MRPL10Q7Z7H8 261 aaKnown RBP28.41■■■□□ 2.14
COL13A1-212ENST00000520133 MREGQ8N565 214 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 TRAIPQ9BWF2 469 aa28.41■■■□□ 2.14
COL13A1-212ENST00000520133 FAM153BP0C7A2 387 aa28.4■■■□□ 2.14
COL13A1-212ENST00000520133 GHRP10912 638 aa28.4■■■□□ 2.14
COL13A1-212ENST00000520133 DRG2P55039 364 aaKnown RBP28.4■■■□□ 2.14
COL13A1-212ENST00000520133 LLGL1Q15334 1064 aa28.4■■■□□ 2.14
COL13A1-212ENST00000520133 FAM153CQ494X1 144 aa28.4■■■□□ 2.14
COL13A1-212ENST00000520133 ADGRF2Q8IZF7 708 aa28.4■■■□□ 2.14
COL13A1-212ENST00000520133 TNIP3Q96KP6 325 aa28.4■■■□□ 2.14
COL13A1-212ENST00000520133 GAD1Q99259 594 aa28.4■■■□□ 2.14
COL13A1-212ENST00000520133 TSPYL2Q9H2G4 693 aaPredicted RBP28.4■■■□□ 2.14
COL13A1-212ENST00000520133 DPH5Q9H2P9 285 aa28.4■■■□□ 2.14
COL13A1-212ENST00000520133 TRMT13Q9NUP7 481 aaKnown RBP28.4■■■□□ 2.14
COL13A1-212ENST00000520133 FAM153AQ9UHL3 310 aa28.4■■■□□ 2.14
COL13A1-212ENST00000520133 ZNF623O75123 536 aa28.39■■■□□ 2.14
COL13A1-212ENST00000520133 KRT1P04264 644 aa28.39■■■□□ 2.14
COL13A1-212ENST00000520133 ECHS1P30084 290 aa28.39■■■□□ 2.14
COL13A1-212ENST00000520133 COPS2P61201 443 aa28.39■■■□□ 2.14
COL13A1-212ENST00000520133 FAM26DQ5JW98 314 aa28.39■■■□□ 2.14
COL13A1-212ENST00000520133 OR6B2Q6IFH4 312 aa28.39■■■□□ 2.14
COL13A1-212ENST00000520133 TTC30AQ86WT1 665 aa28.39■■■□□ 2.14
COL13A1-212ENST00000520133 STK32AQ8WU08 396 aa28.39■■■□□ 2.14
COL13A1-212ENST00000520133 TSEN34Q9BSV6 310 aaKnown RBP28.39■■■□□ 2.14
COL13A1-212ENST00000520133 GOLGA6BA6NDN3 693 aa28.39■■■□□ 2.13
COL13A1-212ENST00000520133 MEIS3P2A8K0S8 358 aa28.39■■■□□ 2.13
COL13A1-212ENST00000520133 E5RJQ4 531 aa28.39■■■□□ 2.13
COL13A1-212ENST00000520133 CAND2O75155 1236 aa28.39■■■□□ 2.13
COL13A1-212ENST00000520133 PDGFRBP09619 1106 aa28.39■■■□□ 2.13
COL13A1-212ENST00000520133 FGFR1P11362 822 aa28.39■■■□□ 2.13
COL13A1-212ENST00000520133 WARSP23381 471 aaKnown RBP28.39■■■□□ 2.13
COL13A1-212ENST00000520133 GBP1P32455 592 aa28.39■■■□□ 2.13
COL13A1-212ENST00000520133 GSTCDQ8NEC7 633 aa28.39■■■□□ 2.13
COL13A1-212ENST00000520133 RNF25Q96BH1 459 aaPredicted RBP28.39■■■□□ 2.13
COL13A1-212ENST00000520133 TRIM31Q9BZY9 425 aa28.39■■■□□ 2.13
COL13A1-212ENST00000520133 DPEP3Q9H4B8 488 aa28.39■■■□□ 2.13
COL13A1-212ENST00000520133 FEZ2Q9UHY8 353 aaPredicted RBP28.39■■■□□ 2.13
COL13A1-212ENST00000520133 SQORQ9Y6N5 450 aa28.39■■■□□ 2.13
COL13A1-212ENST00000520133 ECEL1O95672 775 aa28.38■■■□□ 2.13
COL13A1-212ENST00000520133 KRT7P08729 469 aa28.38■■■□□ 2.13
COL13A1-212ENST00000520133 TCF4P15884 667 aa28.38■■■□□ 2.13
COL13A1-212ENST00000520133 KLF1Q13351 362 aaPredicted RBP28.38■■■□□ 2.13
COL13A1-212ENST00000520133 LPIN1Q14693 890 aa28.38■■■□□ 2.13
COL13A1-212ENST00000520133 ALS2CLQ60I27 953 aa28.38■■■□□ 2.13
COL13A1-212ENST00000520133 EMC1Q8N766 993 aa28.38■■■□□ 2.13
COL13A1-212ENST00000520133 SLAIN1Q8ND83 568 aa28.38■■■□□ 2.13
COL13A1-212ENST00000520133 SLC35F5Q8WV83 523 aa28.38■■■□□ 2.13
COL13A1-212ENST00000520133 C1orf54Q8WWF1 131 aa28.38■■■□□ 2.13
COL13A1-212ENST00000520133 SLCO2A1Q92959 643 aa28.38■■■□□ 2.13
COL13A1-212ENST00000520133 HEMGNQ9BXL5 484 aa28.38■■■□□ 2.13
COL13A1-212ENST00000520133 SLC4A5Q9BY07 1137 aa28.38■■■□□ 2.13
COL13A1-212ENST00000520133 HMX1Q9NP08 348 aaPredicted RBP28.38■■■□□ 2.13
COL13A1-212ENST00000520133 RNF8O76064 485 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms