RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 HEATR6Q6AI08 1181 aaKnown RBP12.67□□□□□ -0.38
POLB-208ENST00000520008 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.67□□□□□ -0.38
POLB-208ENST00000520008 FAM160A2Q8N612 972 aaPredicted RBP12.67□□□□□ -0.38
POLB-208ENST00000520008 TOP6BLQ8N6T0 577 aa12.67□□□□□ -0.38
POLB-208ENST00000520008 MTMR12Q9C0I1 747 aa12.67□□□□□ -0.38
POLB-208ENST00000520008 PCDHB13Q9Y5F0 798 aa12.67□□□□□ -0.38
POLB-208ENST00000520008 HUS1O60921 280 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 PRPF40AO75400 957 aaKnown RBP12.66□□□□□ -0.38
POLB-208ENST00000520008 ADRB1P08588 477 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 ARSAP15289 507 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 TXLNAP40222 546 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 RPL10AP62906 217 aaKnown RBP12.66□□□□□ -0.38
POLB-208ENST00000520008 MYL7Q01449 175 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 FAM160A1Q05DH4 1040 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 BFSP1Q12934 665 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 USP4Q13107 963 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 ZNF77Q15935 545 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 DDR2Q16832 855 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 SOWAHAQ2M3V2 549 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 FAM171BQ6P995 826 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 CCDC73Q6ZRK6 1079 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 CACTINQ8WUQ7 758 aaKnown RBP12.66□□□□□ -0.38
POLB-208ENST00000520008 KBTBD7Q8WVZ9 684 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 GAB3Q8WWW8 586 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 MRPS31Q92665 395 aaKnown RBP12.66□□□□□ -0.38
POLB-208ENST00000520008 EZH1Q92800 747 aaPredicted RBP12.66□□□□□ -0.38
POLB-208ENST00000520008 FUBP3Q96I24 572 aaKnown RBP eCLIP12.66□□□□□ -0.38
POLB-208ENST00000520008 USP28Q96RU2 1077 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 SLC22A12Q96S37 553 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 FBRSL1Q9HCM7 1045 aaKnown RBP12.66□□□□□ -0.38
POLB-208ENST00000520008 PDE11AQ9HCR9 933 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 UXTQ9UBK9 157 aaPredicted RBP12.66□□□□□ -0.38
POLB-208ENST00000520008 GTF3C4Q9UKN8 822 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 MAGED2Q9UNF1 606 aaPredicted RBP12.66□□□□□ -0.38
POLB-208ENST00000520008 SNX9Q9Y5X1 595 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 RALGAPA1Q6GYQ0 2036 aa12.66□□□□□ -0.38
POLB-208ENST00000520008 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.65□□□□□ -0.38
POLB-208ENST00000520008 GOLGA8IPA6NC78 632 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 GOLGA8JA6NMD2 632 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 KIAA0391O15091 583 aaKnown RBP12.65□□□□□ -0.38
POLB-208ENST00000520008 GDF9O60383 454 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 FOXD2O60548 495 aaPredicted RBP12.65□□□□□ -0.38
POLB-208ENST00000520008 EGFP01133 1207 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 IDEP14735 1019 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 TCF3P15923 654 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 GJA4P35212 333 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 STAT6P42226 847 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 RAP1GAPP47736 663 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 LHX1P48742 406 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 GRSF1Q12849 480 aaKnown RBP eCLIP12.65□□□□□ -0.38
POLB-208ENST00000520008 MTF1Q14872 753 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 SLC39A14Q15043 492 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 PDGFRLQ15198 375 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 NAIF1Q69YI7 327 aaPredicted RBP12.65□□□□□ -0.38
POLB-208ENST00000520008 DPH6Q7L8W6 267 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 ADGRF2Q8IZF7 708 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 GPD1LQ8N335 351 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 CSGALNACT2Q8N6G5 542 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 GLIS3Q8NEA6 775 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 LOXL4Q96JB6 756 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 CNTNAP3BQ96NU0 1288 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 CNTNAP3Q9BZ76 1288 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 TMEM206Q9H813 350 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 PANK4Q9NVE7 773 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 INTS13Q9NVM9 706 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 GCNT4Q9P109 453 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 MTMR6Q9Y217 621 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 ACACBO00763 2458 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 SPAG17Q6Q759 2223 aa12.65□□□□□ -0.38
POLB-208ENST00000520008 ATG13O75143 517 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 RNF40O75150 1001 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 AKAP3O75969 853 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 PRPF6O94906 941 aaKnown RBP12.64□□□□□ -0.39
POLB-208ENST00000520008 EPN2O95208 641 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 DRD1P21728 446 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 PCSK1P29120 753 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 HOXD13P35453 343 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 MAGEA11P43364 429 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
POLB-208ENST00000520008 LIMK1P53667 647 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 RBP5P82980 135 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 CEBPZQ03701 1054 aaKnown RBP12.64□□□□□ -0.39
POLB-208ENST00000520008 E2F4Q16254 413 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 LMBRD2Q68DH5 695 aaPredicted RBP12.64□□□□□ -0.39
POLB-208ENST00000520008 SYCP3Q8IZU3 236 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 CAMKK1Q8N5S9 505 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 OR5B17Q8NGF7 314 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 OSCP1Q8WVF1 389 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 CYP2S1Q96SQ9 504 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 PCIF1Q9H4Z3 704 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 ECT2Q9H8V3 914 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 CRTAC1Q9NQ79 661 aa12.64□□□□□ -0.39
POLB-208ENST00000520008 C2orf78A6NCI8 922 aa12.63□□□□□ -0.39
POLB-208ENST00000520008 RPP40O75818 363 aaKnown RBP12.63□□□□□ -0.39
POLB-208ENST00000520008 KRT19P08727 400 aa12.63□□□□□ -0.39
POLB-208ENST00000520008 USP17L7P0C7H9 530 aa12.63□□□□□ -0.39
POLB-208ENST00000520008 TMEM191BP0C7N4 346 aa12.63□□□□□ -0.39
POLB-208ENST00000520008 LMO2P25791 158 aa12.63□□□□□ -0.39
POLB-208ENST00000520008 PXNP49023 591 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms