RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 CRYBG2Q8N1P7 616 aa23.42■■□□□ 1.34
VEGFA-217ENST00000518538 FGF13Q92913 245 aa23.42■■□□□ 1.34
VEGFA-217ENST00000518538 LRRC3Q9BY71 257 aa23.42■■□□□ 1.34
VEGFA-217ENST00000518538 NOTCH4Q99466 2003 aa23.42■■□□□ 1.34
VEGFA-217ENST00000518538 CILPO75339 1184 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 MYL4P12829 197 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 LAMP2P13473 410 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 CD58P19256 250 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 TRIM21P19474 475 aaKnown RBP23.41■■□□□ 1.34
VEGFA-217ENST00000518538 BDNFP23560 247 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 CCR2P41597 374 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 MTIF2P46199 727 aaKnown RBP23.41■■□□□ 1.34
VEGFA-217ENST00000518538 GPR15P49685 360 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 C11orf57Q6ZUT1 292 aaPredicted RBP23.41■■□□□ 1.34
VEGFA-217ENST00000518538 NPAS3Q8IXF0 933 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 LMO3Q8TAP4 145 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 GIPC2Q8TF65 315 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 NT5C1BQ96P26 610 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 ARID3AQ99856 593 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 NT5C1AQ9BXI3 368 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 B3GNT5Q9BYG0 378 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 ELOVL4Q9GZR5 314 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 LIMD1Q9UGP4 676 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 NFE2L3Q9Y4A8 694 aa23.41■■□□□ 1.34
VEGFA-217ENST00000518538 DOCK6Q96HP0 2047 aa23.4■■□□□ 1.34
VEGFA-217ENST00000518538 FGF19O95750 216 aa23.4■■□□□ 1.34
VEGFA-217ENST00000518538 TBXAS1P24557 533 aaPredicted RBP23.4■■□□□ 1.34
VEGFA-217ENST00000518538 TYRO3Q06418 890 aa23.4■■□□□ 1.34
VEGFA-217ENST00000518538 ORC1Q13415 861 aa23.4■■□□□ 1.34
VEGFA-217ENST00000518538 CUL2Q13617 745 aa23.4■■□□□ 1.34
VEGFA-217ENST00000518538 TAF12Q16514 161 aa23.4■■□□□ 1.34
VEGFA-217ENST00000518538 DDR2Q16832 855 aa23.4■■□□□ 1.34
VEGFA-217ENST00000518538 SCN4BQ8IWT1 228 aa23.4■■□□□ 1.34
VEGFA-217ENST00000518538 GPR152Q8TDT2 470 aa23.4■■□□□ 1.34
VEGFA-217ENST00000518538 WHAMMQ8TF30 809 aa23.4■■□□□ 1.34
VEGFA-217ENST00000518538 ING5Q8WYH8 240 aa23.4■■□□□ 1.34
VEGFA-217ENST00000518538 TCEAL4Q96EI5 215 aa23.4■■□□□ 1.34
VEGFA-217ENST00000518538 TWNKQ96RR1 684 aa23.4■■□□□ 1.34
VEGFA-217ENST00000518538 DNAI2Q9GZS0 605 aa23.4■■□□□ 1.34
VEGFA-217ENST00000518538 ZNF334Q9HCZ1 680 aaPredicted RBP23.4■■□□□ 1.34
VEGFA-217ENST00000518538 CISHQ9NSE2 258 aa23.4■■□□□ 1.34
VEGFA-217ENST00000518538 ATP8B3O60423 1300 aa23.39■■□□□ 1.34
VEGFA-217ENST00000518538 TRIM66O15016 1216 aa23.39■■□□□ 1.33
VEGFA-217ENST00000518538 CSH1P0DML2 217 aa23.39■■□□□ 1.33
VEGFA-217ENST00000518538 CSH2P0DML3 217 aa23.39■■□□□ 1.33
VEGFA-217ENST00000518538 CEBPBP17676 345 aa23.39■■□□□ 1.33
VEGFA-217ENST00000518538 GRIK1P39086 918 aa23.39■■□□□ 1.33
VEGFA-217ENST00000518538 LRMPQ12912 555 aa23.39■■□□□ 1.33
VEGFA-217ENST00000518538 MAN2A1Q16706 1144 aa23.39■■□□□ 1.33
VEGFA-217ENST00000518538 SDHAF4Q5VUM1 108 aa23.39■■□□□ 1.33
VEGFA-217ENST00000518538 EHBP1Q8NDI1 1231 aa23.39■■□□□ 1.33
VEGFA-217ENST00000518538 KHSRPQ92945 711 aaKnown RBP eCLIP23.39■■□□□ 1.331e-9■■■□□ 15.1
VEGFA-217ENST00000518538 CEP295NLQ96MC4 621 aa23.39■■□□□ 1.33
VEGFA-217ENST00000518538 ZNF518BQ9C0D4 1074 aa23.39■■□□□ 1.33
VEGFA-217ENST00000518538 SAMSN1Q9NSI8 373 aaKnown RBP23.39■■□□□ 1.33
VEGFA-217ENST00000518538 GDE1Q9NZC3 331 aa23.39■■□□□ 1.33
VEGFA-217ENST00000518538 MUTYHQ9UIF7 546 aa23.39■■□□□ 1.33
VEGFA-217ENST00000518538 KCNJ18B7U540 433 aa23.38■■□□□ 1.33
VEGFA-217ENST00000518538 CLDN5O00501 218 aa23.38■■□□□ 1.33
VEGFA-217ENST00000518538 MOSPD3O75425 235 aa23.38■■□□□ 1.33
VEGFA-217ENST00000518538 YWHAEP62258 255 aaKnown RBP23.38■■□□□ 1.33
VEGFA-217ENST00000518538 KCNJ12Q14500 433 aa23.38■■□□□ 1.33
VEGFA-217ENST00000518538 HSP90AA4PQ58FG1 418 aa23.38■■□□□ 1.33
VEGFA-217ENST00000518538 FAM35AQ86V20 835 aa23.38■■□□□ 1.33
VEGFA-217ENST00000518538 SPATA17Q96L03 361 aa23.38■■□□□ 1.33
VEGFA-217ENST00000518538 INTS2Q9H0H0 1204 aaKnown RBP23.38■■□□□ 1.33
VEGFA-217ENST00000518538 TTC28Q96AY4 2481 aa23.38■■□□□ 1.33
VEGFA-217ENST00000518538 PTPRDP23468 1912 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 NRG2O14511 850 aaPredicted RBP23.37■■□□□ 1.33
VEGFA-217ENST00000518538 DCXO43602 365 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 NOL4O94818 638 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 LETM1O95202 739 aaPredicted RBP23.37■■□□□ 1.33
VEGFA-217ENST00000518538 HMGA1P17096 107 aaKnown RBP23.37■■□□□ 1.33
VEGFA-217ENST00000518538 ANXA13P27216 316 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 PTPN21Q16825 1174 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 PAQR9Q6ZVX9 377 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 FUKQ8N0W3 1084 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 STKLD1Q8NE28 680 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 SHKBP1Q8TBC3 707 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 SMARCD1Q96GM5 515 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 C8orf48Q96LL4 319 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 TUBGCP2Q9BSJ2 902 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 MED10Q9BTT4 135 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 GCNT4Q9P109 453 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 IGSF9Q9P2J2 1179 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 DOCK8Q8NF50 2099 aa23.37■■□□□ 1.33
VEGFA-217ENST00000518538 A0A1W2PRU2 124 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 GTPBP10A4D1E9 387 aaKnown RBP23.36■■□□□ 1.33
VEGFA-217ENST00000518538 SLC38A8A6NNN8 435 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 ANHXE9PGG2 379 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 F8VP50 259 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 PI4K2BG5E9Z4 385 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 ASGR2P07307 311 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 ALADP13716 330 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 CCDC130P13994 396 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 GJA1P17302 382 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 EEF1GP26641 437 aaKnown RBP23.36■■□□□ 1.33
VEGFA-217ENST00000518538 GABRR2P28476 465 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 CDC25CP30307 473 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 MYL5Q02045 173 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms