RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 MCM4P33991 863 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 LTBRP36941 435 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 SCNN1AP37088 669 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 BRCC3P46736 316 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 CD97P48960 835 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 CYP2J2P51589 502 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 KCNQ1P51787 676 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 SNRPFP62306 86 aaKnown RBP6.6□□□□□ -1.35
MRPS28-203ENST00000518371 RBM10P98175 930 aaKnown RBP6.6□□□□□ -1.35
MRPS28-203ENST00000518371 TFAMQ00059 246 aaKnown RBP6.6□□□□□ -1.35
MRPS28-203ENST00000518371 POU5F1Q01860 360 aaKnown RBP6.6□□□□□ -1.35
MRPS28-203ENST00000518371 DSG1Q02413 1049 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 CREMQ03060 361 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 FAM160A1Q05DH4 1040 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 DLX2Q07687 328 aaPredicted RBP6.6□□□□□ -1.35
MRPS28-203ENST00000518371 STK4Q13043 487 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 TMEM132DQ14C87 1099 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 UPP1Q16831 310 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 JADE1Q6IE81 842 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 ANKRD54Q6NXT1 300 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 PDXDC1Q6P996 788 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 DSTYKQ6XUX3 929 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 EPM2AIP1Q7L775 607 aaPredicted RBP6.6□□□□□ -1.35
MRPS28-203ENST00000518371 PALB2Q86YC2 1186 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 GLYCTKQ8IVS8 523 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 GPD1LQ8N335 351 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 OR13H1Q8NG92 308 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.6□□□□□ -1.35
MRPS28-203ENST00000518371 GPR152Q8TDT2 470 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 CACTINQ8WUQ7 758 aaKnown RBP6.6□□□□□ -1.35
MRPS28-203ENST00000518371 SCFD1Q8WVM8 642 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 CCDC97Q96F63 343 aaPredicted RBP6.6□□□□□ -1.35
MRPS28-203ENST00000518371 CBWD1Q9BRT8 395 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 TTPALQ9BTX7 342 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 KIAA1586Q9HCI6 787 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.6□□□□□ -1.35
MRPS28-203ENST00000518371 CHST7Q9NS84 486 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 HSPBP1Q9NZL4 362 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 TUBGCP4Q9UGJ1 667 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 SEPT3Q9UH03 358 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 CD207Q9UJ71 328 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 BARX2Q9UMQ3 279 aaPredicted RBP6.6□□□□□ -1.35
MRPS28-203ENST00000518371 R3HCC1Q9Y3T6 440 aaKnown RBP6.6□□□□□ -1.35
MRPS28-203ENST00000518371 LAMA3Q16787 3333 aa6.6□□□□□ -1.35
MRPS28-203ENST00000518371 UBE4BO95155 1302 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 TMEM189-UBE2V1I3L0A0 370 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 I3L4J1 428 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 TEX28O15482 410 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 EXOC3O60645 756 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 KINO60870 393 aaKnown RBP6.59□□□□□ -1.35
MRPS28-203ENST00000518371 GADD45BO75293 160 aaPredicted RBP6.59□□□□□ -1.35
MRPS28-203ENST00000518371 TBX10O75333 385 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 PRPF40AO75400 957 aaKnown RBP6.59□□□□□ -1.35
MRPS28-203ENST00000518371 SMC2O95347 1197 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 EFEMP2O95967 443 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 GHRHP01286 108 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 ADRB2P07550 413 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 NFICP08651 508 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 EPCAMP16422 314 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 HOXB8P17481 243 aaPredicted RBP6.59□□□□□ -1.35
MRPS28-203ENST00000518371 RPL17P18621 184 aaKnown RBP6.59□□□□□ -1.35
MRPS28-203ENST00000518371 IGFBP6P24592 240 aaPredicted RBP6.59□□□□□ -1.35
MRPS28-203ENST00000518371 LRPAP1P30533 357 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 HOXD13P35453 343 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 GUCY2FP51841 1108 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 ATP11AP98196 1134 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 EHHADHQ08426 723 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 PNOCQ13519 176 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 COL19A1Q14993 1142 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 SURF1Q15526 300 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 ZBTB6Q15916 424 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 PSMD5Q16401 504 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 KNOP1Q1ED39 458 aaKnown RBP6.59□□□□□ -1.35
MRPS28-203ENST00000518371 RTP2Q5QGT7 225 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 SPATA1Q5VX52 437 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 CES5AQ6NT32 575 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 PRSS55Q6UWB4 352 aaPredicted RBP6.59□□□□□ -1.35
MRPS28-203ENST00000518371 CD300LGQ6UXG3 332 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 CRELD2Q6UXH1 353 aaPredicted RBP6.59□□□□□ -1.35
MRPS28-203ENST00000518371 TMEM184AQ6ZMB5 413 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.59□□□□□ -1.35
MRPS28-203ENST00000518371 BRSK2Q8IWQ3 736 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 GPR65Q8IYL9 337 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 RNF168Q8IYW5 571 aaPredicted RBP6.59□□□□□ -1.35
MRPS28-203ENST00000518371 ZSWIM2Q8NEG5 633 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 ENGASEQ8NFI3 743 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 VN1R2Q8NFZ6 395 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 GOLGA5Q8TBA6 731 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 SLC22A17Q8WUG5 538 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 TIGD1Q96MW7 591 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 IPO9Q96P70 1041 aaKnown RBP6.59□□□□□ -1.35
MRPS28-203ENST00000518371 APOL5Q9BWW9 433 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 RXFP1Q9HBX9 757 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 AGPAT3Q9NRZ7 376 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 RMND1Q9NWS8 449 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 DPP3Q9NY33 737 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 RBAKQ9NYW8 714 aaPredicted RBP6.59□□□□□ -1.35
MRPS28-203ENST00000518371 CLEC1BQ9P126 229 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 FNIP2Q9P278 1114 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 CGNQ9P2M7 1197 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms