RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 SYNCQ9H7C4 482 aa24.68■■□□□ 1.54
SLIT3-204ENST00000518140 F8VP50 259 aa24.68■■□□□ 1.54
SLIT3-204ENST00000518140 SLC1A1P43005 524 aa24.68■■□□□ 1.54
SLIT3-204ENST00000518140 GPNMBQ14956 572 aa24.68■■□□□ 1.54
SLIT3-204ENST00000518140 PMF1Q6P1K2 205 aa24.68■■□□□ 1.54
SLIT3-204ENST00000518140 TCRBV7S2A1N4TA0A589 114 aa24.67■■□□□ 1.54
SLIT3-204ENST00000518140 GABBR2O75899 941 aa24.67■■□□□ 1.54
SLIT3-204ENST00000518140 GABRB2P47870 512 aa24.67■■□□□ 1.54
SLIT3-204ENST00000518140 WDR93Q6P2C0 686 aa24.67■■□□□ 1.54
SLIT3-204ENST00000518140 SENP8Q96LD8 212 aa24.67■■□□□ 1.54
SLIT3-204ENST00000518140 RGS18Q9NS28 235 aa24.67■■□□□ 1.54
SLIT3-204ENST00000518140 STRIP2Q9ULQ0 834 aa24.67■■□□□ 1.54
SLIT3-204ENST00000518140 TIMM13Q9Y5L4 95 aaPredicted RBP24.67■■□□□ 1.54
SLIT3-204ENST00000518140 TARSL2A2RTX5 802 aaKnown RBP24.66■■□□□ 1.54
SLIT3-204ENST00000518140 SIGLEC16A6NMB1 481 aa24.66■■□□□ 1.54
SLIT3-204ENST00000518140 ACAT1P24752 427 aaKnown RBP24.66■■□□□ 1.54
SLIT3-204ENST00000518140 RWDD2BP57060 319 aa24.66■■□□□ 1.54
SLIT3-204ENST00000518140 UPP1Q16831 310 aa24.66■■□□□ 1.54
SLIT3-204ENST00000518140 TOP6BLQ8N6T0 577 aa24.66■■□□□ 1.54
SLIT3-204ENST00000518140 DDX27Q96GQ7 796 aaKnown RBP24.66■■□□□ 1.54
SLIT3-204ENST00000518140 FUT8Q9BYC5 575 aa24.66■■□□□ 1.54
SLIT3-204ENST00000518140 DDX47Q9H0S4 455 aaKnown RBP24.66■■□□□ 1.54
SLIT3-204ENST00000518140 IP6K2Q9UHH9 426 aa24.66■■□□□ 1.54
SLIT3-204ENST00000518140 C9IYK1 514 aa24.66■■□□□ 1.54
SLIT3-204ENST00000518140 KRT3P12035 628 aa24.66■■□□□ 1.54
SLIT3-204ENST00000518140 C8orf74Q6P047 294 aa24.66■■□□□ 1.54
SLIT3-204ENST00000518140 LRRC8DQ7L1W4 858 aa24.66■■□□□ 1.54
SLIT3-204ENST00000518140 EMC1Q8N766 993 aa24.66■■□□□ 1.54
SLIT3-204ENST00000518140 PGBD4Q96DM1 585 aa24.66■■□□□ 1.54
SLIT3-204ENST00000518140 E5RJQ4 531 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 WARSP23381 471 aaKnown RBP24.65■■□□□ 1.54
SLIT3-204ENST00000518140 ADORA2BP29275 332 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 PDE4CQ08493 712 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 ZNF268Q14587 947 aaPredicted RBP24.65■■□□□ 1.54
SLIT3-204ENST00000518140 SMC1AQ14683 1233 aaKnown RBP24.65■■□□□ 1.54
SLIT3-204ENST00000518140 ATP13A4Q4VNC1 1196 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 PAN2Q504Q3 1202 aaKnown RBP24.65■■□□□ 1.54
SLIT3-204ENST00000518140 KIAA0319Q5VV43 1072 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 ARHGAP17Q68EM7 881 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 SLC35F5Q8WV83 523 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 PIWIL1Q96J94 861 aaKnown RBP24.65■■□□□ 1.54
SLIT3-204ENST00000518140 METTL5Q9NRN9 209 aaKnown RBP24.65■■□□□ 1.54
SLIT3-204ENST00000518140 WBP1LQ9NX94 342 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 OGDHLQ9ULD0 1010 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 ZSCAN5CA6NGD5 496 aaPredicted RBP24.65■■□□□ 1.54
SLIT3-204ENST00000518140 I3L4J1 428 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 RAD51CO43502 376 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 NBNO60934 754 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 GLI1P08151 1106 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 MYBL2P10244 700 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 SELPP16109 830 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 SSR1P43307 286 aaKnown RBP24.65■■□□□ 1.54
SLIT3-204ENST00000518140 STILQ15468 1287 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.65■■□□□ 1.54
SLIT3-204ENST00000518140 HNRNPLLQ8WVV9 542 aaKnown RBP24.65■■□□□ 1.54
SLIT3-204ENST00000518140 MCRS1Q96EZ8 462 aa24.65■■□□□ 1.54
SLIT3-204ENST00000518140 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.65■■□□□ 1.54
SLIT3-204ENST00000518140 ATN1P54259 1190 aaPredicted RBP24.64■■□□□ 1.53
SLIT3-204ENST00000518140 TIGD5Q53EQ6 642 aa24.64■■□□□ 1.53
SLIT3-204ENST00000518140 CD300LGQ6UXG3 332 aa24.64■■□□□ 1.53
SLIT3-204ENST00000518140 SLC2A14Q8TDB8 520 aa24.64■■□□□ 1.53
SLIT3-204ENST00000518140 F8W810 466 aa24.63■■□□□ 1.53
SLIT3-204ENST00000518140 GABRDO14764 452 aa24.63■■□□□ 1.53
SLIT3-204ENST00000518140 POLR3GO15318 223 aaPredicted RBP24.63■■□□□ 1.53
SLIT3-204ENST00000518140 SART1O43290 800 aaKnown RBP24.63■■□□□ 1.53
SLIT3-204ENST00000518140 TKTP29401 623 aaKnown RBP24.63■■□□□ 1.53
SLIT3-204ENST00000518140 OAS2P29728 719 aaKnown RBP24.63■■□□□ 1.53
SLIT3-204ENST00000518140 RPL9P32969 192 aaKnown RBP24.63■■□□□ 1.53
SLIT3-204ENST00000518140 GJC1P36383 396 aa24.63■■□□□ 1.53
SLIT3-204ENST00000518140 SLC24A5Q71RS6 500 aa24.63■■□□□ 1.53
SLIT3-204ENST00000518140 GSPT2Q8IYD1 628 aaKnown RBP24.63■■□□□ 1.53
SLIT3-204ENST00000518140 HERPUD2Q9BSE4 406 aa24.63■■□□□ 1.53
SLIT3-204ENST00000518140 B4GALT3O60512 393 aa24.63■■□□□ 1.53
SLIT3-204ENST00000518140 PQBP1O60828 265 aaKnown RBP24.63■■□□□ 1.53
SLIT3-204ENST00000518140 MAN1A1P33908 653 aa24.63■■□□□ 1.53
SLIT3-204ENST00000518140 TRADDQ15628 312 aa24.63■■□□□ 1.53
SLIT3-204ENST00000518140 TXNRD3NBQ6F5E7 133 aa24.63■■□□□ 1.53
SLIT3-204ENST00000518140 CCDC70Q6NSX1 233 aa24.63■■□□□ 1.53
SLIT3-204ENST00000518140 FAM183BPQ6ZVS7 135 aa24.63■■□□□ 1.53
SLIT3-204ENST00000518140 ARFGAP1Q8N6T3 406 aa24.63■■□□□ 1.53
SLIT3-204ENST00000518140 B3GALNT2Q8NCR0 500 aa24.63■■□□□ 1.53
SLIT3-204ENST00000518140 HASPINQ8TF76 798 aa24.63■■□□□ 1.53
SLIT3-204ENST00000518140 SKIP12755 728 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 GSCP56915 257 aaPredicted RBP24.62■■□□□ 1.53
SLIT3-204ENST00000518140 FAM189BP81408 668 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 TAP1Q03518 808 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 TAF5Q15542 800 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 CLLU1OSQ5K130 101 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 BEND6Q5SZJ8 279 aaPredicted RBP24.62■■□□□ 1.53
SLIT3-204ENST00000518140 SEL1L2Q5TEA6 688 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 OR6B2Q6IFH4 312 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 DSTYKQ6XUX3 929 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 CCNI2Q6ZMN8 369 aaPredicted RBP24.62■■□□□ 1.53
SLIT3-204ENST00000518140 ANKS1BQ7Z6G8 1248 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 SLC13A5Q86YT5 568 aaPredicted RBP24.62■■□□□ 1.53
SLIT3-204ENST00000518140 SLC4A5Q9BY07 1137 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 STIM2Q9P246 746 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 WDR35Q9P2L0 1181 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 HESX1Q9UBX0 185 aa24.62■■□□□ 1.53
SLIT3-204ENST00000518140 AMACRQ9UHK6 382 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms