RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 MYL6P60660 151 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 CSTF1Q05048 431 aaKnown RBP11.31□□□□□ -0.6
SPIDR-205ENST00000518060 PSMD2Q13200 908 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 MAPRE1Q15691 268 aaKnown RBP11.31□□□□□ -0.6
SPIDR-205ENST00000518060 ZNF699Q32M78 642 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 ARHGAP29Q52LW3 1261 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 TXNDC8Q6A555 127 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 DPH6Q7L8W6 267 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 C12orf56Q8IXR9 622 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 BPIFB1Q8TDL5 484 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 SYAP1Q96A49 352 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-205ENST00000518060 CCDC34Q96HJ3 373 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 MKNK1Q9BUB5 465 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 SLC46A2Q9BY10 475 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 OSBPL6Q9BZF3 934 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 THG1LQ9NWX6 298 aaKnown RBP11.31□□□□□ -0.6
SPIDR-205ENST00000518060 MAGEC2Q9UBF1 373 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-205ENST00000518060 UXTQ9UBK9 157 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-205ENST00000518060 MAPK8IP1Q9UQF2 711 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 HPSEQ9Y251 543 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 FRMD4BQ9Y2L6 1034 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 TCHHQ07283 1943 aa11.31□□□□□ -0.6
SPIDR-205ENST00000518060 LRRIQ3A6PVS8 624 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-205ENST00000518060 A8MXQ7 604 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 PROB1E7EW31 1015 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 GABRDO14764 452 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 CALUO43852 315 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-205ENST00000518060 KIF20AO95235 890 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 CST3P01034 146 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-205ENST00000518060 MYL1P05976 194 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 CKMP06732 381 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 HMGA1P17096 107 aaKnown RBP11.3□□□□□ -0.6
SPIDR-205ENST00000518060 WARSP23381 471 aaKnown RBP11.3□□□□□ -0.6
SPIDR-205ENST00000518060 BDNFP23560 247 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 GNL1P36915 607 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-205ENST00000518060 MAGEA9P43362 315 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 IFRD2Q12894 506 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-205ENST00000518060 NCOA4Q13772 614 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 CFAP221Q4G0U5 840 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 CC2D1AQ6P1N0 951 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-205ENST00000518060 CMTM8Q8IZV2 173 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 CELF5Q8N6W0 485 aaKnown RBP11.3□□□□□ -0.6
SPIDR-205ENST00000518060 FUBP3Q96I24 572 aaKnown RBP eCLIP11.3□□□□□ -0.6
SPIDR-205ENST00000518060 PKMYT1Q99640 499 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 GOLPH3LQ9H4A5 285 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 SMYD3Q9H7B4 428 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 MMRN2Q9H8L6 949 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 CRTAC1Q9NQ79 661 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.3□□□□□ -0.6
SPIDR-205ENST00000518060 GTSE1Q9NYZ3 720 aa11.3□□□□□ -0.6
SPIDR-205ENST00000518060 TRAV19A0A0A6YYK7 116 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 A0A1W2PQ27 194 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 A0A1W2PQ64 194 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 A0A1W2PQD8 194 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 NOL4O94818 638 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 F11P03951 625 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 DDX6P26196 483 aaKnown RBP eCLIP11.29□□□□□ -0.6
SPIDR-205ENST00000518060 ATICP31939 592 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 PIK3CAP42336 1068 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 RAP1GAPP47736 663 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 AP3M2P53677 418 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 TNK2Q07912 1038 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 FCHO2Q0JRZ9 810 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 MTAPQ13126 283 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 LRRC32Q14392 662 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 KCNB1Q14721 858 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 ZNF667Q5HYK9 610 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 TDRD10Q5VZ19 366 aaKnown RBP11.29□□□□□ -0.6
SPIDR-205ENST00000518060 TSSK4Q6SA08 328 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 KRBA2Q6ZNG9 492 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 MYCBPAPQ8TBZ2 947 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 PLEKHO2Q8TD55 490 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 ZNF516Q92618 1163 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 ELMO3Q96BJ8 720 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 MSANTD3Q96H12 275 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 PCED1BQ96HM7 432 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 LRRC3BQ96PB8 259 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 MED10Q9BTT4 135 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 DPEP3Q9H4B8 488 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 C8orf33Q9H7E9 229 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-205ENST00000518060 LMAN1LQ9HAT1 526 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 TRPV5Q9NQA5 729 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 OBP2AQ9NY56 170 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 ZMYM5Q9UJ78 669 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 CCL26Q9Y258 94 aa11.29□□□□□ -0.6
SPIDR-205ENST00000518060 SPECC1L-ADORA2AF8WAN1 911 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 ARNTLO00327 626 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 PDXKO00764 312 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 TRIM66O15016 1216 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 KINO60870 393 aaKnown RBP11.28□□□□□ -0.6
SPIDR-205ENST00000518060 TACC1O75410 805 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 ZNF202O95125 648 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 ABL1P00519 1130 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 LMNAP02545 664 aaKnown RBP11.28□□□□□ -0.6
SPIDR-205ENST00000518060 KRT13P13646 458 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 P4HA1P13674 534 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 NR2F2P24468 414 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 CTHP32929 405 aa11.28□□□□□ -0.6
SPIDR-205ENST00000518060 MAGEA11P43364 429 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms