RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 ALDH6A1Q02252 535 aaKnown RBP-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 APBA1Q02410 837 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 BMPR2Q13873 1038 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ENOX2Q16206 610 aaKnown RBP-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 SNAI3Q3KNW1 292 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 SLC9C1Q4G0N8 1177 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PABPC1LQ4VXU2 614 aaKnown RBP-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 FIGNQ5HY92 759 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PCID2Q5JVF3 399 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 DCST1Q5T197 706 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 CREB3L3Q68CJ9 461 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ARHGAP17Q68EM7 881 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 KIRREL2Q6UWL6 708 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 GDPD4Q6W3E5 623 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 NAPRTQ6XQN6 538 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ZNF793Q6ZN11 406 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 MED25Q71SY5 747 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 MON1BQ7L1V2 547 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 TRAPPC11Q7Z392 1133 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 WDR53Q7Z5U6 358 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ADAT2Q7Z6V5 191 aaKnown RBP-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ADGRD2Q7Z7M1 963 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PPIL6Q8IXY8 311 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 SLC15A3Q8IY34 581 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 DRC7Q8IY82 874 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PRR26Q8N8Z3 221 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 POC1AQ8NBT0 407 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 B3GALNT2Q8NCR0 500 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 TRIM58Q8NG06 486 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 FBXO27Q8NI29 283 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 SH3TC2Q8TF17 1288 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 STAG1Q8WVM7 1258 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 BTN2A2Q8WVV5 523 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 JPH3Q8WXH2 748 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ASB15Q8WXK1 588 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 GLMNQ92990 594 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 USP13Q92995 863 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 TMEM125Q96AQ2 219 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 SENP5Q96HI0 755 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ZIM3Q96PE6 472 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 F2RL3Q96RI0 385 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 FOXB1Q99853 325 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 OPRPNQ99935 248 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 MACROD1Q9BQ69 325 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 RSRP1Q9BUV0 290 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 SELENOOQ9BVL4 669 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 OSBPL6Q9BZF3 934 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 DCLK3Q9C098 648 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ERVMER34-1Q9H9K5 563 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 BRMS1Q9HCU9 246 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 TLR8Q9NR97 1041 aaKnown RBP-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 EHD3Q9NZN3 535 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 HDAC6Q9UBN7 1215 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 RARRES3Q9UL19 164 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ZNF214Q9UL59 606 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 AKT3Q9Y243 479 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 KCNK7Q9Y2U2 307 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 EMC9Q9Y3B6 208 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ATP23Q9Y6H3 246 aa-0.45□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PCNX3Q9H6A9 2034 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 RPS10-NUDT3A0A1W2PQS6 291 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 TCRBV5S4A2TA0A5A2 114 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 LRCOL1A6NCL2 159 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 E9PQ18 207 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 LRP3O75074 770 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ZC3H11AO75152 810 aaKnown RBP eCLIP-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PPP6R2O75170 966 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PF4P02776 101 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 CD5P06127 495 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PRSS2P07478 247 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 RHOP08100 348 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 DAOP14920 347 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 GATA3P23771 443 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 HNRNPMP52272 730 aaKnown RBP eCLIP-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 UCNP55089 124 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 CLRN1P58418 232 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ROR2Q01974 943 aaKnown RBP-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 Q0VFX4 171 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 SLC39A14Q15043 492 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 SWSAP1Q6NVH7 229 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 KYAT3Q6YP21 454 aaKnown RBP-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 FAM196AQ6ZSG2 479 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 CLNKQ7Z7G1 428 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PNMA8AQ86V59 439 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 TRIM59Q8IWR1 403 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 HIPK4Q8NE63 616 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PIK3C3Q8NEB9 887 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PNISRQ8TF01 805 aaKnown RBP-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 FKBP10Q96AY3 582 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 CNOT6LQ96LI5 555 aaKnown RBP-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 C2orf48Q96LS8 159 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 FGD4Q96M96 766 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 C17orf77Q96MU5 243 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 SNX18Q96RF0 628 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 TRIM51Q9BSJ1 452 aa-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 NOC4LQ9BVI4 516 aaKnown RBP-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 TINAGL1Q9GZM7 467 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 DHX36Q9H2U1 1008 aaKnown RBP-0.46□□□□□ -2.48
RNU6-1238P-201ENST00000517215 KAT14Q9H8E8 782 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms