RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 COL7A1Q02388 2944 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 TMEM232C9JQI7 657 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 F6X3S4 739 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 NKX2-8O15522 239 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 PROM1O43490 865 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 DUX1O43812 170 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 DFNA5O60443 496 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 BCAR3O75815 825 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 CKMP06732 381 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 GJA4P35212 333 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 STAT2P52630 851 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 METAP1P53582 386 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 DAB2P98082 770 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 PPARDQ03181 441 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 Q0VFX4 171 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 MTX1Q13505 466 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 STXBP2Q15833 593 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 LONRF3Q496Y0 759 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 UTP14CQ5TAP6 766 aaKnown RBP3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 CYP4A22Q5TCH4 519 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 TSHZ3Q63HK5 1081 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 MRGPRGQ86SM5 289 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 ADGRG6Q86SQ4 1221 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 DTX1Q86Y01 620 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 KRTAP1-3Q8IUG1 177 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 FTSJ3Q8IY81 847 aaKnown RBP3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 IL17RCQ8NAC3 791 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 BPIFB1Q8TDL5 484 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 JPH3Q8WXH2 748 aaPredicted RBP3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 CLEC4DQ8WXI8 215 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 GRAMD1AQ96CP6 724 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 TMEM121Q9BTD3 319 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 SMG9Q9H0W8 520 aaKnown RBP3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 ABCG4Q9H172 646 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 BICC1Q9H694 974 aaKnown RBP3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 MLXIPQ9HAP2 919 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 CYP4F12Q9HCS2 524 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 SLAMF7Q9NQ25 335 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 ASF1BQ9NVP2 202 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 ADGRE2Q9UHX3 823 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 TBX20Q9UMR3 447 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 CCDC171Q6TFL3 1326 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 ANK1P16157 1881 aa3.6□□□□□ -1.83
SCARNA13-201ENST00000516672 OBSL1O75147 1896 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 CCDC187A0A096LP49 1063 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 A0A0U1RQF3 1178 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 TARSL2A2RTX5 802 aaKnown RBP3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 PALM3A6NDB9 673 aaPredicted RBP3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 ZNF891A8MT65 544 aaPredicted RBP3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 BTBD18B2RXH4 712 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 F8W810 466 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 NOP56O00567 594 aaKnown RBP3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 ADAM12O43184 909 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 IGSF3O75054 1194 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 EIF3JO75822 258 aaKnown RBP3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 CIAO1O76071 339 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 GNAI2P04899 355 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 ICAM1P05362 532 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 NBPF7P0C2Y1 421 aaPredicted RBP3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 UBTFL1P0CB47 393 aaPredicted RBP3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 CYP2D6P10635 497 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 MYL4P12829 197 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 LIFP15018 202 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 CREB1P16220 341 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 TIE1P35590 1138 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 GRIK1P39086 918 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 CSNK1G2P78368 415 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 MRPS21P82921 87 aaKnown RBP3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 SP2Q02086 613 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 APBA1Q02410 837 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 FUT2Q10981 343 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 USP41Q3LFD5 358 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 EOGTQ5NDL2 527 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 FAM160B2Q86V87 743 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 PARP9Q8IXQ6 854 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 GPR65Q8IYL9 337 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 HS6ST3Q8IZP7 471 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 CHURC1Q8WUH1 139 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 FRAT1Q92837 279 aaPredicted RBP3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 LPPQ93052 612 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 CLUAP1Q96AJ1 413 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 ARRDC3Q96B67 414 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 SNRNP40Q96DI7 357 aaKnown RBP3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 ELF4Q99607 663 aaPredicted RBP3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 TMEM175Q9BSA9 504 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 GPR174Q9BXC1 333 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 GPR88Q9GZN0 384 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 ZDHHC4Q9NPG8 344 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 ECHDC1Q9NTX5 307 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 THG1LQ9NWX6 298 aaKnown RBP3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 MCM9Q9NXL9 1143 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 NYAP2Q9P242 653 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 CEP126Q9P2H0 1117 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 DDX19BQ9UMR2 479 aa3.59□□□□□ -1.83
SCARNA13-201ENST00000516672 CMYA5Q8N3K9 4069 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 A0A1B0GUH1 482 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 A0A1B0GVM2 712 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 SFI1A8K8P3 1242 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 PLD2O14939 933 aa3.58□□□□□ -1.84
SCARNA13-201ENST00000516672 ADAM23O75077 832 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms