RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	NR2F6	P10588	404 aa		5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	CHRM3	P20309	590 aa		5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	LPO	P22079	712 aa	Predicted RBP	5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	DSC2	Q02487	901 aa		5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	EPHA10	Q5JZY3	1008 aa		5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	DDB2	Q92466	427 aa		5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	DPF1	Q92782	380 aa		5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	ACTRT3	Q9BYD9	372 aa		5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	ETAA1	Q9NY74	926 aa		5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	ADAM21	Q9UKJ8	722 aa		5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	PADI4	Q9UM07	663 aa		5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	ZC3H13	Q5T200	1668 aa	Known RBP	5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	MIA2	Q96PC5	1412 aa		5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	WIPF3	A6NGB9	483 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	VPS4B	O75351	444 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	CHEK2	O96017	543 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	PRKCG	P05129	697 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	EBLN1	P0CF75	366 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	ITGAL	P20701	1170 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	PHKA1	P46020	1223 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	PIK3CG	P48736	1102 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	ODF1	Q14990	250 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	TAF2	Q6P1X5	1199 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	MIER2	Q8N344	545 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	C3orf20	Q8ND61	904 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	ANKS1A	Q92625	1134 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	FKBP10	Q96AY3	582 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	ALG8	Q9BVK2	526 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	C1orf43	Q9BWL3	253 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	MRPS18A	Q9NVS2	196 aa	Known RBP	5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	PTPN23	Q9H3S7	1636 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	FGD6	Q6ZV73	1430 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	KIAA1107	Q9UPP5	1409 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	WASHC2C	Q9Y4E1	1318 aa		5.73	□□□□□ -1.49
RUFY3-215	ENST00000515479	DHX57	Q6P158	1386 aa	Known RBP	5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	CCNB3	Q8WWL7	1395 aa		5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	RARB	P10826	455 aa		5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	CCND1	P24385	295 aa		5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	HABP2	Q14520	560 aa	Predicted RBP	5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	RBM20	Q5T481	1227 aa	Known RBP	5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	PRPF38A	Q8NAV1	312 aa	Known RBP	5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	RFK	Q969G6	155 aa		5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	OSBPL9	Q96SU4	736 aa		5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	SMAD5	Q99717	465 aa	Known RBP	5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	SIK2	Q9H0K1	926 aa		5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	GPR35	Q9HC97	309 aa		5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	EHD3	Q9NZN3	535 aa		5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	POLH	Q9Y253	713 aa		5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	PCDHA3	Q9Y5H8	950 aa		5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	EID1	Q9Y6B2	187 aa		5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	ABCC3	O15438	1527 aa		5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	SHPRH	Q149N8	1683 aa		5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	AOX1	Q06278	1338 aa		5.72	□□□□□ -1.49
RUFY3-215	ENST00000515479	COL3A1	P02461	1466 aa	Predicted RBP	5.71	□□□□□ -1.49
RUFY3-215	ENST00000515479	SCAF11	Q99590	1463 aa	Known RBP	5.71	□□□□□ -1.49
RUFY3-215	ENST00000515479	MSH6	P52701	1360 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	SOAT2	O75908	522 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	KIF20A	O95235	890 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	ARIH2	O95376	493 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	FTH1P19	P0C7X4	201 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	ZFX	P17010	805 aa	Predicted RBP	5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	DRD4	P21917	467 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	PRDX5	P30044	214 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	CD6	P30203	668 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	CCT8	P50990	548 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	FXR1	P51114	621 aa	Known RBP eCLIP	5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	ZNF81	P51508	661 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	EVA1C	P58658	441 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	SRSF7	Q16629	238 aa	Known RBP eCLIP	5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	TMEM119	Q4V9L6	283 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	PLAC9	Q5JTB6	97 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	KIAA1614	Q5VZ46	1190 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	SUMO4	Q6EEV6	95 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	SLC13A1	Q9BZW2	595 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	AMBRA1	Q9C0C7	1298 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	TINAGL1	Q9GZM7	467 aa	Predicted RBP	5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	FEZ2	Q9UHY8	353 aa	Predicted RBP	5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	AGAP1	Q9UPQ3	857 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	RTEL1-TNFRSF6B	F6WH68	1400 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	TNKS	O95271	1327 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	CLSPN	Q9HAW4	1339 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	UBR1	Q8IWV7	1749 aa		5.71	□□□□□ -1.5
RUFY3-215	ENST00000515479	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	WDR91	A4D1P6	747 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	PRSS29P	A6NIE9	313 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	LINC01548	A6NM66	108 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	ALG1L2	C9J202	215 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	DTNB	O60941	627 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	ERBB2	P04626	1255 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	CELA2A	P08217	269 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	AMPD3	Q01432	767 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	SLC10A2	Q12908	348 aa	Predicted RBP	5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	KIF22	Q14807	665 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	TBCC	Q15814	346 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	EZH2	Q15910	746 aa	Known RBP	5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	FAM90A1	Q86YD7	464 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	TNPO1	Q92973	898 aa	Known RBP	5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	RGMA	Q96B86	450 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms