RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 ANKRD20A3Q5VUR7 823 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 METTL7BQ6UX53 244 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 DNAJC14Q6Y2X3 702 aaPredicted RBP13.22□□□□□ -0.29
SDHA-216ENST00000514027 CAPN12Q6ZSI9 719 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 RIOX2Q8IUF8 465 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 SRRM1Q8IYB3 904 aaKnown RBP13.22□□□□□ -0.29
SDHA-216ENST00000514027 RCOR2Q8IZ40 523 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 TRAPPC12Q8WVT3 735 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 DTNBP1Q96EV8 351 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 ACO2Q99798 780 aaKnown RBP13.22□□□□□ -0.29
SDHA-216ENST00000514027 ASB3Q9Y575 518 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 TCP11X1B4DZS4 312 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 UPP2O95045 317 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 CETPP11597 493 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 CD19P15391 556 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 CCND1P24385 295 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 KLRC2P26717 231 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 ALDH3A1P30838 453 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 RAP1GAPP47736 663 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 CD151P48509 253 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 ARSEP51690 589 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 AP3M2P53677 418 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 MXRA7P84157 204 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 TMED2Q15363 201 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 HSDL1Q3SXM5 330 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 SH3D19Q5HYK7 790 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 NUGGCQ68CJ6 796 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 VSTM1Q6UX27 236 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 SPOCD1Q6ZMY3 1216 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 ERICH1Q86X53 443 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 CYP4X1Q8N118 509 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 UBR7Q8N806 425 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 TRIM4Q9C037 500 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 MMADHCQ9H3L0 296 aaPredicted RBP13.21□□□□□ -0.29
SDHA-216ENST00000514027 R3HDMLQ9H3Y0 253 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 PIDD1Q9HB75 910 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 SAYSD1Q9NPB0 183 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 WDR35Q9P2L0 1181 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 C2CD2Q9Y426 696 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.21□□□□□ -0.29
SDHA-216ENST00000514027 LTBP3Q9NS15 1303 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 INO80B-WBP1J3KQ70 363 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 ABLIM1O14639 778 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 LSM8O95777 96 aaKnown RBP13.21□□□□□ -0.29
SDHA-216ENST00000514027 GH1P01241 217 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 PSMC4P43686 418 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 DYNLT1P63172 113 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 LACTBP83111 547 aaPredicted RBP13.21□□□□□ -0.29
SDHA-216ENST00000514027 LMNB2Q03252 620 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 GPS1Q13098 491 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 ORC1Q13415 861 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 SGSM1Q2NKQ1 1148 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 SMTNL2Q2TAL5 461 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 IER5Q5VY09 327 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 TFAP2BQ92481 460 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 KCNN1Q92952 543 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 FAM167AQ96KS9 214 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 CCDC77Q9BR77 488 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 INO80BQ9C086 356 aaPredicted RBP13.21□□□□□ -0.29
SDHA-216ENST00000514027 CCDC134Q9H6E4 229 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 FGFR1OP2Q9NVK5 253 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 POLIQ9UNA4 740 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 CSADQ9Y600 493 aa13.21□□□□□ -0.29
SDHA-216ENST00000514027 POLR2AP24928 1970 aaKnown RBP13.21□□□□□ -0.3
SDHA-216ENST00000514027 SPDYE5A6NIY4 337 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 CCT8L1PA6NM43 557 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 SGK1O00141 431 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 B4GALT5O43286 388 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 IFNB1P01574 187 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 TNNC2P02585 160 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 EDNRBP24530 442 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 MAGEA4P43358 317 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 CCNG1P51959 295 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 EAPPQ56P03 285 aaPredicted RBP13.2□□□□□ -0.3
SDHA-216ENST00000514027 WDR78Q5VTH9 848 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 TBC1D1Q86TI0 1168 aaPredicted RBP13.2□□□□□ -0.3
SDHA-216ENST00000514027 TMEM130Q8N3G9 435 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 OTUD5Q96G74 571 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 ZWILCHQ9H900 591 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 GGT7Q9UJ14 662 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 CPSF3Q9UKF6 684 aaKnown RBP13.2□□□□□ -0.3
SDHA-216ENST00000514027 AGTPBP1Q9UPW5 1226 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 PPP2R3BQ9Y5P8 575 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 CDH16O75309 829 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 SCNN1BP51168 640 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 MCL1Q07820 350 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 MXD4Q14582 209 aaPredicted RBP13.2□□□□□ -0.3
SDHA-216ENST00000514027 FAM133BQ5BKY9 247 aaKnown RBP13.2□□□□□ -0.3
SDHA-216ENST00000514027 PIGWQ7Z7B1 504 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 ZCCHC9Q8N567 271 aaKnown RBP13.2□□□□□ -0.3
SDHA-216ENST00000514027 ANKRD36BP1Q96IX9 119 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 ANKRD27Q96NW4 1050 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 PPP1R16BQ96T49 567 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 TMEM121Q9BTD3 319 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 TJP2Q9UDY2 1190 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 NAALADL1Q9UQQ1 740 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 PTPRFP10586 1907 aa13.2□□□□□ -0.3
SDHA-216ENST00000514027 EXOC1LA0A1B0GW35 172 aa13.19□□□□□ -0.3
SDHA-216ENST00000514027 DNALI1O14645 258 aaPredicted RBP13.19□□□□□ -0.3
SDHA-216ENST00000514027 HOXC6P09630 235 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms