RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ZSCAN16Q9H4T2 348 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-216ENST00000512683 KIAA1586Q9HCI6 787 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 HPS4Q9NQG7 708 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 DDX43Q9NXZ2 648 aaKnown RBP13.5□□□□□ -0.25
VEGFA-216ENST00000512683 RBAKQ9NYW8 714 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-216ENST00000512683 EBF1Q9UH73 591 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.5□□□□□ -0.25
VEGFA-216ENST00000512683 TSC2P49815 1807 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 FRYLO94915 3013 aa13.5□□□□□ -0.25
VEGFA-216ENST00000512683 MIA3Q5JRA6 1907 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 SPTBN2O15020 2390 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 FRMD3A2A2Y4 597 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 MYMKA6NI61 221 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 POLR2BP30876 1174 aaKnown RBP13.49□□□□□ -0.25
VEGFA-216ENST00000512683 NASPP49321 788 aaPredicted RBP13.49□□□□□ -0.25
VEGFA-216ENST00000512683 GALK1P51570 392 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 TXNDC8Q6A555 127 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 HEATR6Q6AI08 1181 aaKnown RBP13.49□□□□□ -0.25
VEGFA-216ENST00000512683 IL31Q6EBC2 164 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 FSTL4Q6MZW2 842 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 FAM171BQ6P995 826 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 VSTM1Q6UX27 236 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 C4orf50Q6ZRC1 276 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 SYT13Q7L8C5 426 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 SYCP3Q8IZU3 236 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 CPA6Q8N4T0 437 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 CSGALNACT2Q8N6G5 542 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 CXorf38Q8TB03 319 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 OSCP1Q8WVF1 389 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 ATP2A3Q93084 1043 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 SPATA17Q96L03 361 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 P2RY13Q9BPV8 354 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 PI4K2AQ9BTU6 479 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 IKZF4Q9H2S9 585 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 EBF3Q9H4W6 596 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 ECT2Q9H8V3 914 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 L1RE1Q9UN81 338 aa13.49□□□□□ -0.25
VEGFA-216ENST00000512683 COL4A3Q01955 1670 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 TRAV19A0A0A6YYK7 116 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 TISP43B9A030 160 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 RHOBTB1O94844 696 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 EPN2O95208 641 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 GCNT3O95395 438 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 ITGB3P05106 788 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 SNRPFP62306 86 aaKnown RBP13.48□□□□□ -0.25
VEGFA-216ENST00000512683 DUOXA2Q1HG44 320 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 PPM1JQ5JR12 505 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 LIMS2Q7Z4I7 341 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 SPATA2LQ8IUW3 424 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-216ENST00000512683 CCDC65Q8IXS2 484 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 C12orf50Q8NA57 414 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-216ENST00000512683 ACDQ96AP0 544 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 CNTNAP3BQ96NU0 1288 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 PKMYT1Q99640 499 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 PANK2Q9BZ23 570 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 CNTNAP3Q9BZ76 1288 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 VPS45Q9NRW7 570 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 TMLHEQ9NVH6 421 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 DUS2Q9NX74 493 aaKnown RBP13.48□□□□□ -0.25
VEGFA-216ENST00000512683 GTF3C4Q9UKN8 822 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 CDH9Q9ULB4 789 aa13.48□□□□□ -0.25
VEGFA-216ENST00000512683 OTOL1A6NHN0 477 aaPredicted RBP13.47□□□□□ -0.25
VEGFA-216ENST00000512683 ZNF233A6NK53 670 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 TM4SF5O14894 197 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 AXIN1O15169 862 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 CCDC192P0DO97 292 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 CYP2F1P24903 491 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 GJA4P35212 333 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 KCNA1Q09470 495 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 SRSF5Q13243 272 aaKnown RBP13.47□□□□□ -0.25
VEGFA-216ENST00000512683 MTF1Q14872 753 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 DDR2Q16832 855 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 PLA2G2CQ5R387 149 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 GPD1LQ8N335 351 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 LINC00301Q8NCQ3 95 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 CD101Q93033 1021 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 ANKRD36BP1Q96IX9 119 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 SMG9Q9H0W8 520 aaKnown RBP13.47□□□□□ -0.25
VEGFA-216ENST00000512683 INTS13Q9NVM9 706 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 C2orf42Q9NWW7 574 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 TFIP11Q9UBB9 837 aaKnown RBP13.47□□□□□ -0.25
VEGFA-216ENST00000512683 MAGEC2Q9UBF1 373 aaPredicted RBP13.47□□□□□ -0.25
VEGFA-216ENST00000512683 ARHGAP26Q9UNA1 814 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 MAGED2Q9UNF1 606 aaPredicted RBP13.47□□□□□ -0.25
VEGFA-216ENST00000512683 CCL26Q9Y258 94 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 SNX9Q9Y5X1 595 aa13.47□□□□□ -0.25
VEGFA-216ENST00000512683 PATJQ8NI35 1801 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 RNF40O75150 1001 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 APBB3O95704 486 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 TNNC2P02585 160 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 TMEM191BP0C7N4 346 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 IDEP14735 1019 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 HDCP19113 662 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 STAT6P42226 847 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 IFNAR2P48551 515 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 AMPD3Q01432 767 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 ELF2Q15723 593 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 ZNF77Q15935 545 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 SOWAHAQ2M3V2 549 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 AASDHQ4L235 1098 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms