RNA–Protein interactions for RNA: ENST00000512537.1

ACSF2-222, Transcript of acyl-CoA synthetase family member 2, human

TSL 2

Gene ACSF2, Length 483 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-222	ENST00000512537	PRAMEF12	O95522	483 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	CST3	P01034	146 aa	Predicted RBP	13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	F11	P03951	625 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	NR3C1	P04150	777 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	RPN1	P04843	607 aa	Known RBP	13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	ATIC	P31939	592 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	PSMC1	P62191	440 aa	Known RBP	13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	TNNC1	P63316	161 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	CLDN10	P78369	228 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	PLCB2	Q00722	1185 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	TRPC3	Q13507	836 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	DDR2	Q16832	855 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	CCDC142	Q17RM4	750 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	C1orf228	Q6PIY5	440 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	KRBA2	Q6ZNG9	492 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	TMEM150A	Q86TG1	271 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	PLEKHO2	Q8TD55	490 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	CSGALNACT1	Q8TDX6	532 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	ZNF516	Q92618	1163 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	MRPS31	Q92665	395 aa	Known RBP	13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	NKD2	Q969F2	451 aa	Predicted RBP	13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	MYLPF	Q96A32	169 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	SYAP1	Q96A49	352 aa	Predicted RBP	13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	TRMT2B	Q96GJ1	504 aa	Known RBP	13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	MYRFL	Q96LU7	910 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	SLC46A2	Q9BY10	475 aa		13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.34	□□□□□ -0.27
ACSF2-222	ENST00000512537	PRR23A	A6NEV1	266 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	SLC38A8	A6NNN8	435 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	PHACTR2	O75167	634 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	ATP2C2	O75185	946 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	RHOBTB3	O94955	611 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	LMO2	P25791	158 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	CASP4	P49662	377 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	MYL6	P60660	151 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	DPYD	Q12882	1025 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	BIRC3	Q13489	604 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	WDR72	Q3MJ13	1102 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	SDHAF4	Q5VUM1	108 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	VSTM1	Q6UX27	236 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	MON1A	Q86VX9	555 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	SCN4B	Q8IWT1	228 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	CMTM8	Q8IZV2	173 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	ZNF687	Q8N1G0	1237 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	CELF5	Q8N6W0	485 aa	Known RBP	13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	MYCBPAP	Q8TBZ2	947 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	BPIFB1	Q8TDL5	484 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	PARD3B	Q8TEW8	1205 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	FAM3C	Q92520	227 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	CCDC34	Q96HJ3	373 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	CEP295NL	Q96MC4	621 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	LRRC3B	Q96PB8	259 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	MRPL45	Q9BRJ2	306 aa	Known RBP	13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	IER2	Q9BTL4	223 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	XYLT2	Q9H1B5	865 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	SNX25	Q9H3E2	840 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	SEMA4A	Q9H3S1	761 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	GOLPH3L	Q9H4A5	285 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	VRTN	Q9H8Y1	702 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	KIF9	Q9HAQ2	790 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	CRTAC1	Q9NQ79	661 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	FBXO4	Q9UKT5	387 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	TRAF3IP3	Q9Y228	551 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	TICRR	Q7Z2Z1	1910 aa		13.33	□□□□□ -0.28
ACSF2-222	ENST00000512537	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	LAMTOR5	O43504	91 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	CALU	O43852	315 aa	Predicted RBP	13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	PDGFRB	P09619	1106 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	PRR29	P0C7W0	189 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	SP9	P0CG40	484 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	GNL1	P36915	607 aa	Predicted RBP	13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	AVPR1A	P37288	418 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	KPNA1	P52294	538 aa	Predicted RBP	13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	FZD5	Q13467	585 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	ZNF268	Q14587	947 aa	Predicted RBP	13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	KCNB1	Q14721	858 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	ZNF528	Q3MIS6	628 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	TDRD10	Q5VZ19	366 aa	Known RBP	13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	ZC3H14	Q6PJT7	736 aa	Known RBP	13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	ASCL5	Q7RTU5	278 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	GPIHBP1	Q8IV16	184 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	MAB21L3	Q8N8X9	362 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	STKLD1	Q8NE28	680 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	OR6B3	Q8NGW1	331 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	TMC2	Q8TDI7	906 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	SPATA17	Q96L03	361 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	CHRD	Q9H2X0	955 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	THG1L	Q9NWX6	298 aa	Known RBP	13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	NDRG2	Q9UN36	371 aa	Known RBP	13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	FRMD4B	Q9Y2L6	1034 aa		13.32	□□□□□ -0.28
ACSF2-222	ENST00000512537	TRIM66	O15016	1216 aa		13.31	□□□□□ -0.28
ACSF2-222	ENST00000512537	MAPK13	O15264	365 aa		13.31	□□□□□ -0.28
ACSF2-222	ENST00000512537	TADA3	O75528	432 aa		13.31	□□□□□ -0.28
ACSF2-222	ENST00000512537	ZNF202	O95125	648 aa		13.31	□□□□□ -0.28
ACSF2-222	ENST00000512537	C4BPA	P04003	597 aa	Known RBP	13.31	□□□□□ -0.28
ACSF2-222	ENST00000512537	ANXA13	P27216	316 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms