RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 CFAP221Q4G0U5 840 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 ZNF667Q5HYK9 610 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 TMEM150AQ86TG1 271 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 FAM122AQ96E09 287 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 GSDMAQ96QA5 445 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 FOXQ1Q9C009 403 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 SMG9Q9H0W8 520 aaKnown RBP17.62■□□□□ 0.41
DDX41-213ENST00000512027 ABCB6Q9NP58 842 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 KIF26AQ9ULI4 1882 aaPredicted RBP17.62■□□□□ 0.41
DDX41-213ENST00000512027 ANAPC1Q9H1A4 1944 aa17.62■□□□□ 0.41
DDX41-213ENST00000512027 SLC38A8A6NNN8 435 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 HEPACAM2A8MVW5 462 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 A8MXQ7 604 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 KINO60870 393 aaKnown RBP17.61■□□□□ 0.41
DDX41-213ENST00000512027 PRAMEF12O95522 483 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 HLA-DRAP01903 254 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 CD72P21854 359 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 PSMC2P35998 433 aaKnown RBP17.61■□□□□ 0.41
DDX41-213ENST00000512027 PIK3CAP42336 1068 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 CLCN5P51795 746 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 AP3M2P53677 418 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 ORC1Q13415 861 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 SLC44A4Q53GD3 710 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 ARID3BQ8IVW6 561 aaPredicted RBP17.61■□□□□ 0.41
DDX41-213ENST00000512027 PCED1BQ96HM7 432 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 VRTNQ9H8Y1 702 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 HEBP1Q9NRV9 189 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 CHMP5Q9NZZ3 219 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 MAGEC2Q9UBF1 373 aaPredicted RBP17.61■□□□□ 0.41
DDX41-213ENST00000512027 MAN1B1Q9UKM7 699 aa17.61■□□□□ 0.41
DDX41-213ENST00000512027 ARIH1Q9Y4X5 557 aaPredicted RBP17.61■□□□□ 0.41
DDX41-213ENST00000512027 MAPK13O15264 365 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 TADA3O75528 432 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 F11P03951 625 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 CSH1P0DML2 217 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 CSH2P0DML3 217 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 KRT13P13646 458 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 CD44P16070 742 aaKnown RBP17.6■□□□□ 0.41
DDX41-213ENST00000512027 PTPN1P18031 435 aaKnown RBP17.6■□□□□ 0.41
DDX41-213ENST00000512027 RPL13P26373 211 aaKnown RBP17.6■□□□□ 0.41
DDX41-213ENST00000512027 CDC25CP30307 473 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 GDI1P31150 447 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 CACNA2D1P54289 1103 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 NLRP12P59046 1061 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 RPL10AP62906 217 aaKnown RBP17.6■□□□□ 0.41
DDX41-213ENST00000512027 NHLH1Q02575 133 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 MLF2Q15773 248 aaPredicted RBP17.6■□□□□ 0.41
DDX41-213ENST00000512027 EDRF1Q3B7T1 1238 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 ARHGAP15Q53QZ3 475 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 ANKRD40Q6AI12 368 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 C4orf50Q6ZRC1 276 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 INTS8Q75QN2 995 aaKnown RBP17.6■□□□□ 0.41
DDX41-213ENST00000512027 MYCBPAPQ8TBZ2 947 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 TAS1R2Q8TE23 839 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 FUBP3Q96I24 572 aaKnown RBP eCLIP17.6■□□□□ 0.41
DDX41-213ENST00000512027 LRRC3BQ96PB8 259 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 GCNAQ96QF7 691 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 PHOX2BQ99453 314 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 TRMT61BQ9BVS5 477 aaKnown RBP17.6■□□□□ 0.41
DDX41-213ENST00000512027 BRD9Q9H8M2 597 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 TRPV4Q9HBA0 871 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 TMEM30AQ9NV96 361 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 FAM86C1Q9NVL1 165 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 HMGXB4Q9UGU5 601 aa17.6■□□□□ 0.41
DDX41-213ENST00000512027 H0Y858 1186 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 BIN1O00499 593 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 CLDN5O00501 218 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 IKBKBO14920 756 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 NOL4O94818 638 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 FGF19O95750 216 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 DCNP07585 359 aaKnown RBP17.59■□□□□ 0.41
DDX41-213ENST00000512027 PSMC3P17980 439 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 TXNDC8Q6A555 127 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 TPRG1Q6ZUI0 275 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 ADSSL1Q8N142 457 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 MAB21L3Q8N8X9 362 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 SLC46A2Q9BY10 475 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 ZNF518BQ9C0D4 1074 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 GPR88Q9GZN0 384 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 KCNH6Q9H252 994 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 TASP1Q9H6P5 420 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 APOBEC3GQ9HC16 384 aaKnown RBP17.59■□□□□ 0.41
DDX41-213ENST00000512027 MTF2Q9Y483 593 aaPredicted RBP17.59■□□□□ 0.41
DDX41-213ENST00000512027 MYH10P35580 1976 aa17.59■□□□□ 0.41
DDX41-213ENST00000512027 SHISA7A6NL88 538 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 CETN3O15182 167 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 GALR2O43603 387 aaPredicted RBP17.58■□□□□ 0.4
DDX41-213ENST00000512027 ASS1P00966 412 aaKnown RBP17.58■□□□□ 0.4
DDX41-213ENST00000512027 BMP6P22004 513 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 GRIK1P39086 918 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 ANP32AP39687 249 aaKnown RBP17.58■□□□□ 0.4
DDX41-213ENST00000512027 MAGEA11P43364 429 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 ASPAP45381 313 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 STARD6P59095 220 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 USP46P62068 366 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 PFKPQ01813 784 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 SGSM1Q2NKQ1 1148 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 COBLL1Q53SF7 1204 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 MFSD6LQ8IWD5 586 aa17.58■□□□□ 0.4
DDX41-213ENST00000512027 B3GALNT2Q8NCR0 500 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms